RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ADIRFQ15847 76 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM162BQ5T6X4 162 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 WDR25Q64LD2 544 aaPredicted RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 WDR73Q6P4I2 378 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 C16orf82Q7Z2V1 217 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 MYPOPQ86VE0 399 aaPredicted RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 COMMD2Q86X83 199 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 OR5AU1Q8NGC0 362 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 TMEM171Q8WVE6 324 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 POM121L2Q96KW2 1035 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 C1orf147Q96MC9 270 aaPredicted RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 CCL19Q99731 98 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAAP24Q9BTP7 215 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 OR2H1Q9GZK4 316 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 PARP12Q9H0J9 701 aaKnown RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 RIMS4Q9H426 269 aaPredicted RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 FUT9Q9Y231 359 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 IGLV3-9A0A075B6K5 115 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 C3orf85A0A1B0GTC6 90 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 A0A1W2PR80 420 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 B9A039 149 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 H7C1C5 153 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 SIRPB1O00241 398 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 SYNGR3O43761 229 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 CELA3BP08861 270 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 OR4A8P0C604 315 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 ZNF32P17041 273 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 TMEM11P17152 192 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 PI3P19957 117 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 OTX1P32242 354 aaPredicted RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 PPOXP50336 477 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 RPP30P78346 268 aaKnown RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 PSG4Q00888 419 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 ID3Q02535 119 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 PLP2Q04941 152 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 Q0VG73 95 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 CNN3Q15417 329 aaKnown RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 TBC1D28Q2M2D7 210 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 SLC22A6Q4U2R8 563 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 Q6ZSR3 168 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 MUC15Q8N387 334 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 GJC3Q8NFK1 279 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 NUDT10Q8NFP7 164 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 FGFBP3Q8TAT2 258 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 ADAT3Q96EY9 351 aaPredicted RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 UBTD1Q9HAC8 227 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 UBE2J1Q9Y385 318 aaPredicted RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 PXMP4Q9Y6I8 212 aa6.72□□□□□ -1.33
RTF1-205ENST00000558298 NSD1Q96L73 2696 aaPredicted RBP6.72□□□□□ -1.33
RTF1-205ENST00000558298 SAA2-SAA4A0A096LPE2 208 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 A0A0A6YYD4 124 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 CTXND1A0A1B0GTU2 59 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 CEBPZOSA8MTT3 80 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 VSTM5A8MXK1 200 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 C17orf112F2Z3M2 114 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 DEGS1O15121 323 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 MPPED1O15442 326 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 PHF1O43189 567 aaPredicted RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 ZNF737O75373 536 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 TNFSF4P23510 183 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 CDAP32320 146 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 GABRA2P47869 451 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 DYNLT3P51808 116 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 HNRNPA3P51991 378 aaKnown RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 CCL20P78556 96 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 KISS1Q15726 138 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 MSMO1Q15800 293 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 ADIPOQQ15848 244 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 COLCA1Q6ZS62 124 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 LYZL2Q7Z4W2 148 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 OR5AS1Q8N127 324 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 SIGLECL1Q8N7X8 197 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 CPEB3Q8NE35 698 aaKnown RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 WFDC11Q8NEX6 87 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 OR5D13Q8NGL4 314 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 C11orf40Q8WZ69 217 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 NEIL1Q96FI4 390 aaPredicted RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 SDSLQ96GA7 329 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 Q96M66 194 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 PNRC2Q9NPJ4 139 aaKnown RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 CENPMQ9NSP4 180 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 SLC39A9Q9NUM3 307 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 IL36GQ9NZH8 169 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 COA3Q9Y2R0 106 aaPredicted RBP6.71□□□□□ -1.34
RTF1-205ENST00000558298 LHFPL6Q9Y693 200 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 LY96Q9Y6Y9 160 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 ZFHX3Q15911 3703 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 TANC2Q9HCD6 1990 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 ZANQ9Y493 2812 aa6.71□□□□□ -1.34
RTF1-205ENST00000558298 IGHV1-69-2A0A0G2JMI3 117 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms