RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 FOXB1Q99853 325 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF703Q9H7S9 590 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 IL36BQ9NZH7 164 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ASH1LQ9NR48 2969 aaKnown RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ICE1Q9Y2F5 2266 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 SDK2Q58EX2 2172 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 LMO7DNF2Z398 122 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 TMPRSS2O15393 492 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 RPL19P84098 196 aaKnown RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 MAJINQ3KP22 176 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 PDLIM3Q53GG5 364 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 STUMQ69YW2 141 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 FAM58AQ8N1B3 248 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 SERTAD4Q9NUC0 356 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF391Q9UJN7 358 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 YLPM1P49750 1951 aaKnown RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 CCDC168Q8NDH2 2452 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 TRBV20OR9-2A0A075B6H5 130 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 IGHV1OR21-1A0A087WYE8 117 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 A0A096LPE4 126 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 A0A0J9YW62 118 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 IGHV3-64DA0A0J9YX35 117 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 A0A1W2PPZ6 126 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A10PA6NDY2 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM166BA8MTA8 275 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 DEGS1O15121 323 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 RAMP3O60896 148 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FKBP2P26885 142 aaKnown RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 PCBD1P61457 104 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FOXL2NBQ6ZUU3 175 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 MMD2Q8IY49 270 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SAXO1Q8IYX7 474 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 ZIC4Q8N9L1 334 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF596Q8TC21 504 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SRXN1Q9BYN0 137 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 CACNA1DQ01668 2161 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 C5orf49A4QMS7 147 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 NXPH2O95156 264 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 C3orf79P0CE67 100 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 CA6P23280 308 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 TNFSF4P23510 183 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 TSPOP30536 169 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SRIP30626 198 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 AARDQ4LEZ3 155 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 Q56UQ5 140 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 LDLRAD2Q5SZI1 272 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 LCN12Q6JVE5 192 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 VHLLQ6RSH7 139 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 DRAM1Q8N682 238 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 ST6GALNAC3Q8NDV1 305 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 PRORYQ9H606 182 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 CRIM1Q9NZV1 1036 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 C19orf25Q9UFG5 118 aaPredicted RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 LOC105371242A0A075B767 164 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 IGLV3-32A0A0A0MS00 114 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 ODAMA1E959 279 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 RNF212BA8MTL3 300 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 CELA2AP08217 269 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 RAC2P15153 192 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 BPIFB3P59826 476 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 RPL31P62899 125 aaKnown RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SSPNQ14714 243 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 FXYD3Q14802 87 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SRSF7Q16629 238 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 YRDCQ86U90 279 aaKnown RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 SPOCK3Q9BQ16 436 aa4.25□□□□□ -1.73
HMG20A-204ENST00000558288 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
HMG20A-204ENST00000558288 TRAV24A0A0B4J272 114 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 A0A1W2PS18 150 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 FAM90A26D6RGX4 464 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 CXCL13O43927 109 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
HMG20A-204ENST00000558288 SCRG1O75711 98 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 CCL3P10147 92 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 CD1BP29016 333 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 CTRLP40313 264 aa4.24□□□□□ -1.73
HMG20A-204ENST00000558288 GFRA1P56159 465 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms