RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 COMMD1Q8N668 190 aa6.96□□□□□ -1.3
USP3-208ENST00000558285 IL1F10Q8WWZ1 152 aa6.96□□□□□ -1.3
USP3-208ENST00000558285 YPEL2Q96QA6 119 aa6.96□□□□□ -1.3
USP3-208ENST00000558285 ABHD14AQ9BUJ0 271 aa6.96□□□□□ -1.3
USP3-208ENST00000558285 KCNIP3Q9Y2W7 256 aa6.96□□□□□ -1.3
USP3-208ENST00000558285 TRBV6-6A0A0A6YYG2 114 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 LY6LH3BQJ8 138 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 TCAPO15273 167 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 DIRAS3O95661 229 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 MOSP00540 346 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 IFNA17P01571 189 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 OR8U8P0C7N1 319 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 PF4V1P10720 104 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 S100A2P29034 98 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 INSL4Q14641 139 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 C2orf76Q3KRA6 126 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
USP3-208ENST00000558285 C6orf201Q7Z4U5 140 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 ZNF546Q86UE3 836 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 IZUMO1Q8IYV9 350 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 LYG1Q8N1E2 194 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 DRAM1Q8N682 238 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 OR51D1Q8NGF3 324 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 MRPL30Q8TCC3 161 aaKnown RBP6.95□□□□□ -1.3
USP3-208ENST00000558285 PIFOQ8TCI5 191 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 FCAMRQ8WWV6 532 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 SAT2Q96F10 170 aaPredicted RBP6.95□□□□□ -1.3
USP3-208ENST00000558285 RASL11BQ9BPW5 248 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 FAAP24Q9BTP7 215 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
USP3-208ENST00000558285 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 NCBP2LA6PVI3 153 aaKnown RBP6.94□□□□□ -1.3
USP3-208ENST00000558285 J3QL48 77 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 RAB29O14966 203 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 CHST1O43916 411 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 IGKV1D-33P01593 117 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 IGKV1-33P01594 117 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 SNRNP70P08621 437 aaKnown RBP6.94□□□□□ -1.3
USP3-208ENST00000558285 HOXB5P09067 269 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 OR5H8P0DN80 308 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 HOXA5P20719 270 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 MC5RP33032 325 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ZNF137PP52743 207 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 LOXL3P58215 753 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 SSBP1Q04837 148 aaKnown RBP6.94□□□□□ -1.3
USP3-208ENST00000558285 PJVKQ0ZLH3 352 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ARFRP1Q13795 201 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 PNLIPRP3Q17RR3 467 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 OR10K2Q6IF99 312 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ACOT7LQ6ZUV0 252 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 NDUFA11Q86Y39 141 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 DYNAPQ8N1N2 210 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ARRDC1Q8N5I2 433 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 RTN4IP1Q8WWV3 396 aaPredicted RBP6.94□□□□□ -1.3
USP3-208ENST00000558285 LEAP2Q969E1 77 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 HIST1H2BAQ96A08 127 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 SULT4A1Q9BR01 284 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 LPAR5Q9H1C0 372 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 KIAA1456Q9P272 454 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 ETV7Q9Y603 341 aa6.94□□□□□ -1.3
USP3-208ENST00000558285 TRAV39A0A0B4J263 110 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 MFNGO00587 321 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 NAPSAO96009 420 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 CTXN2P0C2S0 81 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 DDTP30046 118 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 CDX1P47902 265 aaPredicted RBP6.93□□□□□ -1.3
USP3-208ENST00000558285 NPBWR1P48145 328 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 HLA-DRB3P79483 266 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 QRFPP83859 136 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 UNC119Q13432 240 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 COTL1Q14019 142 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 ABCA11PQ4W5N1 156 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 MORN2Q502X0 79 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 MRPL52Q86TS9 123 aaKnown RBP6.93□□□□□ -1.3
USP3-208ENST00000558285 NR2C2APQ86WQ0 139 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR10V1Q8NGI7 309 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR4A4PQ8NGN8 299 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR1S2Q8NGQ3 325 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR10R2Q8NGX6 335 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR1L1Q8NH94 360 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 R3HDM4Q96D70 268 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 NOL4LQ96MY1 436 aaPredicted RBP6.93□□□□□ -1.3
USP3-208ENST00000558285 ATG5Q9H1Y0 275 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 LIN7CQ9NUP9 197 aaKnown RBP6.93□□□□□ -1.3
USP3-208ENST00000558285 TNFSF18Q9UNG2 199 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 ELOA3CA0A087WX78 387 aaPredicted RBP6.93□□□□□ -1.3
USP3-208ENST00000558285 A0A0A6YYH2 397 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 A0A1W2PPI3 338 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 OR5H14A6NHG9 310 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 A6NJ64 397 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 FAM90A9PA6NNJ1 464 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 TRDCB7Z8K6 153 aa6.93□□□□□ -1.3
USP3-208ENST00000558285 IGHV3-7P01780 117 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms