RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 C19orf24Q9BVV8 132 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 QTRT1Q9BXR0 403 aaKnown RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 CHODLQ9H9P2 273 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 HEYLQ9NQ87 328 aaPredicted RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 TPSG1Q9NRR2 321 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 RPUSD1Q9UJJ7 312 aaKnown RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 IGHV3-43A0A0B4J1X8 118 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 A0A1B0GV50 99 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 A0A1W2PPV4 95 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ZFP92A6NM28 416 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 C15orf61A6NNL5 157 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 C17orf100A8MU93 164 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ZNF727A8MUV8 499 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 DEFB108AA8MXU0 73 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 F6UZH7 168 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 CLN5O75503 358 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 KBTBD11O94819 623 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 MT-CO2P00403 227 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 IGHV3-43DP0DP04 118 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 HOXA5P20719 270 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 BMP5P22003 454 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 GPX4P36969 197 aaPredicted RBP6.86□□□□□ -1.31
SPG11-209ENST00000558253 FAM27E3Q08E93 113 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 CT45A1Q5HYN5 189 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 VHLLQ6RSH7 139 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ETV3LQ6ZN32 361 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 Q6ZS46 218 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 SLC25A48Q6ZT89 311 aaKnown RBP6.86□□□□□ -1.31
SPG11-209ENST00000558253 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ZNRF1Q8ND25 227 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ZNF439Q8NDP4 499 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 CT45A3Q8NHU0 189 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 OSR1Q8TAX0 266 aaPredicted RBP6.86□□□□□ -1.31
SPG11-209ENST00000558253 RAB24Q969Q5 203 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 GAFA1Q96PS6 74 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 C20orf24Q9BUV8 137 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 MS4A5Q9H3V2 200 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 SDF2L1Q9HCN8 221 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 NPVFQ9HCQ7 196 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 TMEM14BQ9NUH8 114 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 GAR1Q9NY12 217 aaKnown RBP6.86□□□□□ -1.31
SPG11-209ENST00000558253 RFNGQ9Y644 331 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 ARL2-SNX15V9GYD0 113 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 DOCK7Q96N67 2140 aa6.86□□□□□ -1.31
SPG11-209ENST00000558253 TRBV24-1A0A075B6N3 115 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 IGHV3OR15-7A0A075B7D8 119 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 A0A0G2JNJ9 132 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 MED19A0JLT2 244 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 INS-IGF2F8WCM5 200 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 PPP1R2P9O14990 202 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 PROP1O75360 226 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 IL6RP08887 468 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 OR9G9P0C7N8 305 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 CD99P14209 185 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 AKR1C3P42330 323 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 CDC34P49427 236 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 ZNF134P52741 427 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 UCNP55089 124 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 ELLP55199 621 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 CASP6P55212 293 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 WDR25Q64LD2 544 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 ADAM5Q6NVV9 412 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 ACSM6Q6P461 480 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 GFRALQ6UXV0 394 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 ZFP82Q8N141 532 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 LINC00311Q8N616 119 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 OR5B3Q8NH48 314 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 VSTM2AQ8TAG5 236 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 RHOVQ96L33 236 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 TMEM68Q96MH6 324 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 NOL4LQ96MY1 436 aaPredicted RBP6.85□□□□□ -1.31
SPG11-209ENST00000558253 SMIM7Q9BQ49 75 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 DCTN5Q9BTE1 182 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 Q9UFV3 132 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 TCF19Q9Y242 345 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 TP53TG5Q9Y2B4 290 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 PTPRBP23467 1997 aa6.85□□□□□ -1.31
SPG11-209ENST00000558253 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 A0A1W2PPE2 198 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 CXorf1O96002 111 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 APOA2P02652 100 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 OR4A8P0C604 315 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
SPG11-209ENST00000558253 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
SPG11-209ENST00000558253 CEBPGP53567 150 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 ELOBQ15370 118 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 EFNB3Q15768 340 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 ADIPOQQ15848 244 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 LTC4SQ16873 150 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 LRRC10Q5BKY1 277 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 TEPPQ6URK8 271 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 ZNF833PQ6ZTB9 187 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.31
SPG11-209ENST00000558253 TGIF2LYQ8IUE0 185 aa6.84□□□□□ -1.31
SPG11-209ENST00000558253 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms