RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TSPAN4O14817 238 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 TMEM127O75204 238 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 IGHV3-23P01764 117 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 CLEC3BP05452 202 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 LIMS3P0CW19 117 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 LIMS4P0CW20 117 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 GABRB1P18505 474 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 DCKP27707 260 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 PSMB6P28072 239 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 HTR2CP28335 458 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 FCGR2BP31994 310 aaPredicted RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 HLA-DRB3P79483 266 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 NDUFA5Q16718 116 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 MRGPRG-AS1Q2M3A8 158 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 ZIK1Q3SY52 487 aaPredicted RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 TTC23Q5W5X9 447 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 XAF1Q6GPH4 301 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 STX12Q86Y82 276 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 CCDC197Q8NCU1 140 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 OR13C5Q8NGS8 318 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 OR5B3Q8NH48 314 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 OSR1Q8TAX0 266 aaPredicted RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 CHAC2Q8WUX2 184 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 TSC22D3Q99576 134 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 SLC29A1Q99808 456 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 DCUN1D5Q9BTE7 237 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 C11orf68Q9H3H3 251 aaKnown RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 ZNF430Q9H8G1 570 aaPredicted RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 Q9N2K0 584 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 FGF20Q9NP95 211 aaPredicted RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 SDHAF2Q9NX18 166 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 OAZ3Q9UMX2 235 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 CBY1Q9Y3M2 126 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 RBM7Q9Y580 266 aaKnown RBP3.81□□□□□ -1.8
SPG11-208ENST00000558155 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 TRAV6A0A075B6T7 132 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 IRGMA1A4Y4 181 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 NPIPB5A8MRT5 1133 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 TRDCB7Z8K6 153 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 RTL8CO15255 209 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 MRPS14O60783 128 aaKnown RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 CRYZL1O95825 349 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 GHRHP01286 108 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 ALPLP05186 524 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 P0DMU3 169 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 FAM231AP0DMU4 169 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 FAM231CP0DMU5 169 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 DEFA4P12838 97 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 MYL12AP19105 171 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 SRMP19623 302 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 VBP1P61758 197 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 RPS11P62280 158 aaKnown RBP eCLIP3.8□□□□□ -1.8
SPG11-208ENST00000558155 RPS27AP62979 156 aaKnown RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 CDK10Q15131 360 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 ZNF124Q15973 351 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 LGALS9BQ3B8N2 356 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 SOHLH1Q5JUK2 328 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR2G6Q5TZ20 316 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 PVRIGQ6DKI7 326 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR10K2Q6IF99 312 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 PLET1Q6UQ28 207 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 IDO2Q6ZQW0 420 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR4A4PQ8NGN8 299 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 CD300LFQ8TDQ1 290 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 CYYR1Q96J86 154 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 CXorf58Q96LI9 332 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 CCDC140Q96MF4 163 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 FYTTD1Q96QD9 318 aaKnown RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 CMSS1Q9BQ75 279 aaKnown RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 URM1Q9BTM9 101 aaKnown RBP3.8□□□□□ -1.8
SPG11-208ENST00000558155 TM2D1Q9BX74 207 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR2D2Q9H210 308 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 OR51E2Q9H255 320 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 HRH4Q9H3N8 390 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 C8orf4Q9NR00 106 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 SLC2A9Q9NRM0 540 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 AK3Q9UIJ7 227 aa3.8□□□□□ -1.8
SPG11-208ENST00000558155 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 TRAV10A0A0B4J240 114 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 IGKV1-6A0A0C4DH72 117 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 HMX3A6NHT5 357 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 L7N2F9 121 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 M0R2N4 97 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 DEFB4AO15263 64 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 PFDN1O60925 122 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 NOL3O60936 208 aaKnown RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 CRYGCP07315 174 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 DUTP33316 252 aaKnown RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 MAS1LP35410 378 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 CBX5P45973 191 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 RPL27AP46776 148 aaKnown RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 TAS2R43P59537 309 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 COTL1Q14019 142 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms