RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AKAP14Q86UN6 197 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 ZNF429Q86V71 674 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 PUSL1Q8N0Z8 303 aaKnown RBP9.95□□□□□ -0.82
TPM1-209ENST00000558072 BCL6BQ8N143 479 aaPredicted RBP9.95□□□□□ -0.82
TPM1-209ENST00000558072 DYNAPQ8N1N2 210 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 OR5B3Q8NH48 314 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 OR1S1Q8NH92 325 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 LHFPL5Q8TAF8 219 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 TMEM167AQ8TBQ9 72 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 RBM14Q96PK6 669 aaKnown RBP9.95□□□□□ -0.82
TPM1-209ENST00000558072 RASL11BQ9BPW5 248 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 ZNF436Q9C0F3 470 aaPredicted RBP9.95□□□□□ -0.82
TPM1-209ENST00000558072 TCF19Q9Y242 345 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 ZNF257Q9Y2Q1 563 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
TPM1-209ENST00000558072 HIVEP1P15822 2718 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 hCG_2014768A0A024R1R8 64 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 WRBO00258 174 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 UPK2O00526 184 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 PVALBP20472 110 aaPredicted RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 IER3P46695 156 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 LINC00205P59089 165 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 PSG5Q15238 335 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 FCN2Q15485 313 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 HSD17B13Q7Z5P4 300 aaPredicted RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 PPP1R27Q86WC6 154 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 Q8N6K4 173 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 GPR146Q96CH1 333 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 CIB3Q96Q77 187 aaPredicted RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 COMMD5Q9GZQ3 224 aa9.94□□□□□ -0.82
TPM1-209ENST00000558072 METTL1Q9UBP6 276 aaKnown RBP9.94□□□□□ -0.82
TPM1-209ENST00000558072 H3BUX3 64 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 ST8SIA3O43173 380 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 SLC25A17O43808 307 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 PFDN1O60925 122 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 ADAP1O75689 374 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 CCNKO75909 580 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 TSPAN9O75954 239 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 SCAF4O95104 1147 aaKnown RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 IL6RP08887 468 aaPredicted RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 P0C879 139 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 SAA1P0DJI8 122 aaPredicted RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 NKX2-1P43699 371 aaPredicted RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 SPCS3P61009 180 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 RPL15P61313 204 aaKnown RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 C5orf64Q2M2E5 130 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 AARDQ4LEZ3 155 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 SSX9Q7RTT3 188 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 ZBTB8BQ8NAP8 495 aaPredicted RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 FYTTD1Q96QD9 318 aaKnown RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 SRSF8Q9BRL6 282 aaKnown RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 ENY2Q9NPA8 101 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 GSKIPQ9P0R6 139 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 FOXA2Q9Y261 457 aaPredicted RBP9.93□□□□□ -0.82
TPM1-209ENST00000558072 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 HIVEP2P31629 2446 aa9.93□□□□□ -0.82
TPM1-209ENST00000558072 A0A1W2PN81 502 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 A6NDX4 124 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 HAX1O00165 279 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 IFNA17P01571 189 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 IGLV2-23P01705 113 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 CHRNA7P36544 502 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 F2RL1P55085 397 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 ATP5IP56385 69 aaPredicted RBP9.92□□□□□ -0.82
TPM1-209ENST00000558072 HSPE1P61604 102 aaKnown RBP9.92□□□□□ -0.82
TPM1-209ENST00000558072 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
TPM1-209ENST00000558072 HNF4GQ14541 408 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 PRSS8Q16651 343 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 FBLN7Q53RD9 439 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 NOXA1Q86UR1 476 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 OR11H7Q8NGC8 314 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 OR1L8Q8NGR8 309 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 PPP1R14BQ96C90 147 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 TMEM68Q96MH6 324 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 SLC25A33Q9BSK2 321 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 TMEM14BQ9NUH8 114 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 VPREB3Q9UKI3 123 aa9.92□□□□□ -0.82
TPM1-209ENST00000558072 SRRM4A7MD48 611 aaKnown RBP9.91□□□□□ -0.82
TPM1-209ENST00000558072 CLDN34H7C241 214 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 KCNAB3O43448 404 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 GPR137BO60478 399 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 PITX3O75364 302 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 HLA-DRB1P01911 266 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 CRYGBP07316 175 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 FAM157CP0CG43 387 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 PSMB6P28072 239 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
TPM1-209ENST00000558072 RELBQ01201 579 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms