RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 OR4A5Q8NH83 315 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 HRASLSQ9HDD0 168 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 ZFP57Q9NU63 452 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
PBX4-202ENST00000557978 G3V318 75 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 S1PR2O95136 353 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 PI3P19957 117 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 MAS1LP35410 378 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 LPAR6P43657 344 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 ERVK-16P61578 105 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 FOXE3Q13461 319 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
PBX4-202ENST00000557978 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 UNQ5815/PRO19632Q6UWF5 114 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 LFNGQ8NES3 379 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 R3HDM4Q96D70 268 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
PBX4-202ENST00000557978 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
PBX4-202ENST00000557978 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 FBXO7Q9Y3I1 522 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
PBX4-202ENST00000557978 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 SERPINE2P07093 398 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 EGR2P11161 476 aaPredicted RBP13.13□□□□□ -0.31
PBX4-202ENST00000557978 RPA2P15927 270 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 CD40LGP29965 261 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 BAK1Q16611 211 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 NSUN5P1Q3KNT7 163 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 TMEM65Q6PI78 240 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 S100ZQ8WXG8 99 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 PHB2Q99623 299 aa13.13□□□□□ -0.31
PBX4-202ENST00000557978 CMYA5Q8N3K9 4069 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 C3orf85A0A1B0GTC6 90 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 A0A1W2PN81 502 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 MARCH11A6NNE9 402 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 H0Y980 276 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 CHRNA7P36544 502 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 SSBP2P81877 361 aaPredicted RBP13.12□□□□□ -0.31
PBX4-202ENST00000557978 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 CADM3Q8N126 398 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
PBX4-202ENST00000557978 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
PBX4-202ENST00000557978 C5orf66Q9H5L9 145 aa13.12□□□□□ -0.31
PBX4-202ENST00000557978 FOXA2Q9Y261 457 aaPredicted RBP13.12□□□□□ -0.31
PBX4-202ENST00000557978 NAP1L6A6NFF2 107 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 CENPXA8MT69 81 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 KRASP01116 189 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 IGLV1-40P01703 118 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 FGF2P09038 288 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 PSMB8P28062 276 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 SLC6A1P30531 599 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
PBX4-202ENST00000557978 C19orf54Q5BKX5 351 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 SPIN2AQ99865 258 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
PBX4-202ENST00000557978 RTBDNQ9BSG5 229 aaPredicted RBP13.11□□□□□ -0.31
PBX4-202ENST00000557978 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 TMEM140Q9NV12 185 aa13.11□□□□□ -0.31
PBX4-202ENST00000557978 TEX13DA0A0J9YY54 714 aaPredicted RBP13.1□□□□□ -0.31
PBX4-202ENST00000557978 ATG12O94817 140 aa13.1□□□□□ -0.31
PBX4-202ENST00000557978 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
PBX4-202ENST00000557978 IL7P13232 177 aa13.1□□□□□ -0.31
PBX4-202ENST00000557978 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
PBX4-202ENST00000557978 MGAM2Q2M2H8 2515 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 ADARB2-AS1A8MUL3 147 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 UPK2O00526 184 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
PBX4-202ENST00000557978 PF4V1P10720 104 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 HLA-GP17693 338 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 G6PCP35575 357 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 RPL23AP62750 156 aaKnown RBP13.09□□□□□ -0.31
PBX4-202ENST00000557978 TP53RKQ96S44 253 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 C7orf50Q9BRJ6 194 aaKnown RBP13.09□□□□□ -0.31
PBX4-202ENST00000557978 CCDC32Q9BV29 185 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 SLA2Q9H6Q3 261 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
PBX4-202ENST00000557978 SNAPC5O75971 98 aa13.08□□□□□ -0.32
PBX4-202ENST00000557978 RPL27AP46776 148 aaKnown RBP13.08□□□□□ -0.32
PBX4-202ENST00000557978 CDX1P47902 265 aaPredicted RBP13.08□□□□□ -0.32
PBX4-202ENST00000557978 RAB9AP51151 201 aa13.08□□□□□ -0.32
PBX4-202ENST00000557978 SGPP2Q8IWX5 399 aa13.08□□□□□ -0.32
PBX4-202ENST00000557978 COMMD5Q9GZQ3 224 aa13.08□□□□□ -0.32
PBX4-202ENST00000557978 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms