RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 OR13C8Q8NGS7 320 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 OR10K1Q8NGX5 313 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 CD200R1Q8TD46 325 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 LMX1AQ8TE12 382 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 MGLLQ99685 303 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 SEC22CQ9BRL7 303 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 PBDC1Q9BVG4 233 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 MND1Q9BWT6 205 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 YTHDC2Q9H6S0 1430 aaKnown RBP2.38□□□□□ -2.03
TDP1-217ENST00000557782 FBXL12Q9NXK8 326 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 OR5V1Q9UGF6 321 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 SS18L2Q9UHA2 77 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 SSR3Q9UNL2 185 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 KLK5Q9Y337 293 aaPredicted RBP2.38□□□□□ -2.03
TDP1-217ENST00000557782 S4R3C0 116 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 U3KQK5 164 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 BAZ1BQ9UIG0 1483 aaKnown RBP2.38□□□□□ -2.03
TDP1-217ENST00000557782 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 A0A0J9YY10 115 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 A0A1B0GX78 115 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 A8MWP6 167 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 H7C1C5 153 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 LECT2O14960 151 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 NDUFB2O95178 105 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 WISP3O95389 354 aaPredicted RBP2.37□□□□□ -2.03
TDP1-217ENST00000557782 ZNF682O95780 498 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 SMIM10L2AP0DMW4 78 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 SMIM10L2BP0DMW5 78 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 CPMP14384 443 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 SLC25A16P16260 332 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 RAB13P51153 203 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 NCALDP61601 193 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 LCN6P62502 163 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 RPL30P62888 115 aaKnown RBP2.37□□□□□ -2.03
TDP1-217ENST00000557782 GNG5P63218 68 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 LGALSLQ3ZCW2 172 aaPredicted RBP2.37□□□□□ -2.03
TDP1-217ENST00000557782 LDLRAD2Q5SZI1 272 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 RASL11AQ6T310 242 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 ZNF283Q8N7M2 679 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 TMEM35BQ8NCS4 154 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 FNDC9Q8TBE3 224 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 SLC7A6Q92536 515 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 ERMAPQ96PL5 475 aaPredicted RBP2.37□□□□□ -2.03
TDP1-217ENST00000557782 AIF1LQ9BQI0 150 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 TMEM222Q9H0R3 208 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
TDP1-217ENST00000557782 ACER3Q9NUN7 267 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 TAS2R7Q9NYW3 318 aa2.37□□□□□ -2.03
TDP1-217ENST00000557782 ROBO3Q96MS0 1386 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 HECW2Q9P2P5 1572 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 MIA2Q96PC5 1412 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 IGLV3-12A0A075B6K2 115 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 A0A087WUU8 490 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 IGSF23A1L1A6 192 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 GRIFINA4D1Z8 144 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 MAP1LC3B2A6NCE7 125 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 DPRXA6NFQ7 191 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 A8MUU9 505 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 H3BQ85 93 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 ORC5O43913 435 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 MFSD11O43934 449 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 ZNF324O75467 553 aaPredicted RBP2.36□□□□□ -2.03
TDP1-217ENST00000557782 IFNA7P01567 189 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 IGHV3-53P01767 116 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 LGALS1P09382 135 aaKnown RBP2.36□□□□□ -2.03
TDP1-217ENST00000557782 CRYBB3P26998 211 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 RPL27AP46776 148 aaKnown RBP2.36□□□□□ -2.03
TDP1-217ENST00000557782 GABRA2P47869 451 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SERPINB10P48595 397 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 BIKQ13323 160 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 TMEM69Q5SWH9 247 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 DCUN1D2Q6PH85 259 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 Q6Q795 121 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 FAM24BQ8N5W8 94 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 Q8N9L7 120 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 RPS4Y2Q8TD47 263 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SKA2Q8WVK7 121 aaPredicted RBP2.36□□□□□ -2.03
TDP1-217ENST00000557782 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SPIN2AQ99865 258 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SPIN2BQ9BPZ2 258 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 MAP1LC3BQ9GZQ8 125 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 EFCAB1Q9HAE3 211 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 ANAPC11Q9NYG5 84 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 TVP23BQ9NYZ1 205 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 HSPB11Q9Y547 144 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 SMAD5-AS1Q9Y6J3 95 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 DCAF1Q9Y4B6 1507 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 TONSLQ96HA7 1378 aa2.36□□□□□ -2.03
TDP1-217ENST00000557782 ADAMTS9Q9P2N4 1935 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 COL2A1P02458 1487 aaPredicted RBP2.35□□□□□ -2.03
TDP1-217ENST00000557782 PLA2R1Q13018 1463 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 C16orf90A8MZG2 172 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 I3L521 148 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 HMGN1P05114 100 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms