RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 YTHDF2Q9Y5A9 579 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 PRSS46E5RG02 174 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 AQP7O14520 342 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 TFF1P04155 84 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 CD33P20138 364 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 BTF3P20290 206 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 MPV17P39210 176 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 LINC00310P59036 64 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 ERVK-16P61578 105 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 RPL31P62899 125 aaKnown RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 HTD2P86397 168 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 KLF14Q8TD94 323 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 KLF13Q9Y2Y9 288 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 C9JCJ5 164 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 SLC17A3O00476 420 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 FCN1O00602 326 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 SP1P08047 785 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 LGALS4P56470 323 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 RHOBP62745 196 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 HLA-DRB5Q30154 266 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 SAMD10Q9BYL1 202 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 NPVFQ9HCQ7 196 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 IL17BQ9UHF5 180 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 TRBV9A0A0B4J1U6 114 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 KLRC4-KLRK1H3BQV0 150 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 K7EN84 100 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 GFRA3O60609 400 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 ACP1P24666 158 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 HOXA4Q00056 320 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 Q0VG73 95 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 LTC4SQ16873 150 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 SMIM21Q3B7S5 101 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 TMPRSS7Q7RTY8 843 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 METRNQ9UJH8 293 aa9.8□□□□□ -0.84
VIPAS39-211ENST00000557658 TRGV10A0A0A0MS01 117 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 C15orf65H3BRN8 121 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 DLEU1O43261 78 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 IL6RP08887 468 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 WDR82Q6UXN9 313 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 ABHD12Q8N2K0 398 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 TMEM208Q9BTX3 173 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 DEFB127Q9H1M4 99 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 PAM16Q9Y3D7 125 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 LSM4Q9Y4Z0 139 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 TET2Q6N021 2002 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 COL27A1Q8IZC6 1860 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 AHCTF1Q8WYP5 2266 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 M0R1X1 148 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 IRF2P14316 349 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 CDKN1AP38936 164 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 IER3P46695 156 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 EFNB3Q15768 340 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 TDRG1Q3Y452 100 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 KRTCAP3Q53RY4 240 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 MMD2Q8IY49 270 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 VN1R17PQ8TDU5 208 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 SPRY4Q9C004 299 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 GNG12Q9UBI6 72 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
VIPAS39-211ENST00000557658 PROP1O75360 226 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 IGHV1-2P23083 117 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 RELBQ01201 579 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 GAGE1Q13065 139 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 RAB31Q13636 194 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 EDDM3AQ14507 147 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TEPPQ6URK8 271 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TMEM105Q8N8V8 129 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 Q8TCH9 128 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 DCTN5Q9BTE1 182 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TRGV8A0A0C4DH27 118 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 C9orf172C9J069 976 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 LYZL6O75951 148 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 SPATA31B1PQ5VZV4 182 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 VKORC1L1Q8N0U8 176 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 STPG3Q8N7X2 389 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 SIGLECL1Q8N7X8 197 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 FAM216AQ8WUB2 273 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 S1PR3Q99500 378 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 SEPSECSQ9HD40 501 aaKnown RBP9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 MED13Q9UHV7 2174 aa9.78□□□□□ -0.84
VIPAS39-211ENST00000557658 TRGV5A0A0B4J1U4 118 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 CRYABP02511 175 aaKnown RBP9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 AREGP15514 252 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 LRP11Q86VZ4 500 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms