RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 OR4A47Q6IF82 309 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 TMED4Q7Z7H5 227 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 TMEM230Q96A57 120 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 SEC22AQ96IW7 307 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
SUPT16H-208ENST00000557652 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 SNAPC5O75971 98 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 RAB25P57735 213 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 RPL8P62917 257 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 SLC35B1P78383 322 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 CX3CL1P78423 397 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 IFITM3Q01628 133 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 DCTN2Q13561 401 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 H2BFWTQ7Z2G1 175 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 ZNF695Q8IW36 515 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 LGI3Q8N145 548 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 ADAD2Q8NCV1 583 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 SGMS2Q8NHU3 365 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 SRSF8Q9BRL6 282 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 SERTAD4Q9NUC0 356 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 TMEM140Q9NV12 185 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 PRNDQ9UKY0 176 aa11.16□□□□□ -0.62
SUPT16H-208ENST00000557652 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 UPK2O00526 184 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 SFT2D2O95562 160 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 PTTG1O95997 202 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 CA2P00918 260 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 KRASP01116 189 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 VDAC1P21796 283 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 AKR1C2P52895 323 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 PROK1P58294 105 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 SUPT4H1P63272 117 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 TMEM187Q14656 261 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 AWAT1Q58HT5 328 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 SPIN2AQ99865 258 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 SPIN2BQ9BPZ2 258 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 NUDT15Q9NV35 164 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
SUPT16H-208ENST00000557652 ARPC1BO15143 372 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 PRAF2O60831 178 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 CNIH1O95406 144 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 DUS4LO95620 317 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 H2AFB2P0C5Z0 115 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 OR4E1P0C645 316 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 HLA-GP17693 338 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 MDKP21741 143 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 VAMP1P23763 118 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 SRSF2Q01130 221 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 FXYD3Q14802 87 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 MRPL41Q8IXM3 137 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 STPG2Q8N412 459 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 COQ8AQ8NI60 647 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
SUPT16H-208ENST00000557652 BRI3O95415 125 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 IL5P05113 134 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 P0C879 139 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 SLC25A6P12236 298 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 G6PCP35575 357 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 DHRS2Q13268 280 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 SP6Q3SY56 376 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 C12orf54Q6X4T0 127 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 SSX9Q7RTT3 188 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 VKORC1L1Q8N0U8 176 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 RNASE11Q8TAA1 199 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 WIPF2Q8TF74 440 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 COA4Q9NYJ1 87 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
SUPT16H-208ENST00000557652 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 PSMB11A5LHX3 300 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 H3BUA1 57 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 FCN1O00602 326 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms