RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-211ENST00000557623 VSIG4Q9Y279 399 aa9.74□□□□□ -0.85
SLIRP-211ENST00000557623 M0QYG6 137 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 CCL24O00175 119 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 SOX15O60248 233 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 RAMP3O60896 148 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 KBTBD11O94819 623 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 CD3DP04234 171 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 RLN1P04808 185 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 NQO2P16083 231 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 MAS1LP35410 378 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 DGCR2P98153 550 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 KIAA0141Q14154 515 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-211ENST00000557623 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 ETV3LQ6ZN32 361 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 VKORC1L1Q8N0U8 176 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 PUSL1Q8N0Z8 303 aaKnown RBP9.73□□□□□ -0.85
SLIRP-211ENST00000557623 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 OR4A5Q8NH83 315 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 TMEM167AQ8TBQ9 72 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 SMIM4Q8WVI0 70 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
SLIRP-211ENST00000557623 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
SLIRP-211ENST00000557623 P2RX4Q99571 388 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 RSRP1Q9BUV0 290 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 TINAGL1Q9GZM7 467 aaPredicted RBP9.73□□□□□ -0.85
SLIRP-211ENST00000557623 PLEKHA2Q9HB19 425 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
SLIRP-211ENST00000557623 TNCP24821 2201 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 FABP12A6NFH5 140 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 G3V4G9 280 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MPPED1O15442 326 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 RAB3DO95716 219 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 CD74P04233 296 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 F2RP25116 425 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 TNFSF8P32971 234 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 S100A5P33763 92 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 TPPP2P59282 170 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 ERVK-16P61578 105 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 RUNX1Q01196 453 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MEF2DQ14814 521 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 POU2AF1Q16633 256 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 STEAP1BQ6NZ63 245 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MRPL41Q8IXM3 137 aaKnown RBP9.72□□□□□ -0.85
SLIRP-211ENST00000557623 OR5T1Q8NG75 326 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
SLIRP-211ENST00000557623 ZNF486Q96H40 463 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-211ENST00000557623 RAX2Q96IS3 184 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SLIRP-211ENST00000557623 GPR61Q9BZJ8 451 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 FAM212BQ9NTI7 297 aaPredicted RBP9.72□□□□□ -0.85
SLIRP-211ENST00000557623 BET1LQ9NYM9 111 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
SLIRP-211ENST00000557623 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
SLIRP-211ENST00000557623 GSTZ1O43708 216 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-211ENST00000557623 BRI3O95415 125 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 TRGV3P03979 118 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 PGAM2P15259 253 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 ECI1P42126 302 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 DEFA6Q01524 100 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 DEFB136Q30KP8 78 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 PHLDA2Q53GA4 152 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 OR4A47Q6IF82 309 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 SSX9Q7RTT3 188 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 SLC25A42Q86VD7 318 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 LHFPL1Q86WI0 220 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 DMBX1Q8NFW5 382 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 OR11H1Q8NG94 326 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 MS4A10Q96PG2 267 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 GNB4Q9HAV0 340 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 HRASLSQ9HDD0 168 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 NDUFA13Q9P0J0 144 aa9.71□□□□□ -0.86
SLIRP-211ENST00000557623 A0A0G2JLM5 398 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 DISC1C4P0D8 188 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 I3L521 148 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 S1PR2O95136 353 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 FGF2P09038 288 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
SLIRP-211ENST00000557623 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 OR9G9P0C7N8 305 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 AKAIN1P0CW23 69 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 IGLL1P15814 213 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 RPL27AP46776 148 aaKnown RBP9.7□□□□□ -0.86
SLIRP-211ENST00000557623 RAB25P57735 213 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
SLIRP-211ENST00000557623 BEAN1Q3B7T3 259 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 TBC1D26Q86UD7 250 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 C1QL4Q86Z23 238 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 CADM3Q8N126 398 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 OR1N2Q8NGR9 330 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 TERB2Q8NHR7 220 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 ZFAND1Q8TCF1 268 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 CASTOR1Q8WTX7 329 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 DPF1Q92782 380 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms