RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 C8orf87E5RJ46 101 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 GYG2O15488 501 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 DLEU1O43261 78 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 COX7A2P2O60397 106 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 EPPINO95925 133 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CA2P00918 260 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 IFNA10P01566 189 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 PFN1P07737 140 aaKnown RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 RBP1P09455 135 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 FBP1P09467 338 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 LINC00869P0C866 280 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 SMIM6P0DI80 62 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CD28P10747 220 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 SPI1P17947 270 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 PRTN3P24158 256 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 GADD45AP24522 165 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TGFBR1P36897 503 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 SERPINB10P48595 397 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 RAB13P51153 203 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TBPL1P62380 186 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 RPS24P62847 133 aaKnown RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ELF3P78545 371 aaPredicted RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 HLA-DRB3P79483 266 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ELOCQ15369 112 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM241Q24JQ0 296 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 PLPPR5Q32ZL2 321 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 LINC00303Q3SY05 128 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CENPWQ5EE01 88 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 FAM201AQ5SY85 155 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 C1orf194Q5T5A4 169 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 HENMT1Q5T8I9 393 aaKnown RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 NXNL2Q5VZ03 156 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ZFAND6Q6FIF0 208 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF773Q6PK81 442 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TCF24Q7RTU0 167 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 C20orf196Q8IYI0 205 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 OSR2Q8N2R0 312 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 DEFB125Q8N687 156 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 OR4D11Q8NGI4 311 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 OR8S1Q8NH09 359 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 OR4K15Q8NH41 348 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 OR5K1Q8NHB7 308 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TWIST2Q8WVJ9 160 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ROPN1LQ96C74 230 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CAPZA3Q96KX2 299 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 LINC00477Q96M19 166 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 RNF157Q96PX1 679 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 DERL3Q96Q80 235 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 HSPB9Q9BQS6 159 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 EIF5A2Q9GZV4 153 aaKnown RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ACER3Q9NUN7 267 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 C14orf105Q9NVL8 296 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 PRNDQ9UKY0 176 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 WASHC3Q9Y3C0 194 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ADGRB3O60242 1522 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CROCCQ5TZA2 2017 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 PLEKHH2Q8IVE3 1493 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 EP400Q96L91 3159 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 ALS2Q96Q42 1657 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 CCDC88AQ3V6T2 1871 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 KIF15Q9NS87 1388 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GLI3P10071 1580 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ASXL1Q8IXJ9 1541 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 COL24A1Q17RW2 1714 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 SHANK3Q9BYB0 1731 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 NWD2Q9ULI1 1742 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 IGHV1-3A0A0C4DH29 117 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 FAM236DA0A1B0GTK5 79 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 MYBPHLA2RUH7 354 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 TRAPPC13A5PLN9 417 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM150BA6NC51 233 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 H7C1C5 153 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 AIPO00170 330 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 LGALS9O00182 355 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 DEGS1O15121 323 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 CYB5BO43169 146 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 SLC37A4O43826 429 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 KCNK2O95069 426 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 NDUFC2O95298 119 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 IGHG2P01859 326 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 DBIP07108 87 aaKnown RBP1.98□□□□□ -2.09
TRAV28-201ENST00000557548 FAM236CP0DP71 79 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 IL1RNP18510 177 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 CDK2P24941 298 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 S100A7P31151 101 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GLRXP35754 106 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 PSMD8P48556 350 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 PIGPP57054 158 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 DNAJB13P59910 316 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 LCN6P62502 163 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GNG5P63218 68 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 FABP5Q01469 135 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ATP5G2Q06055 141 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM267Q0VDI3 215 aaPredicted RBP1.98□□□□□ -2.09
TRAV28-201ENST00000557548 IL15RAQ13261 267 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ALKAL1Q6UXT8 129 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 SHISA6Q6ZSJ9 500 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF101Q8IZC7 436 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms