RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR11G2Q8NGC1 345 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR5A2Q8NGI9 324 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR5AR1Q8NGP9 310 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR5B3Q8NH48 314 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NEIL3Q8TAT5 605 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF675Q8TD23 568 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 BLNKQ8WV28 456 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TNFAIP8L1Q8WVP5 186 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 FGF14Q92915 247 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 STMN2Q93045 179 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DERL3Q96Q80 235 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PITX2Q99697 317 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PSMG3Q9BT73 122 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ADAT1Q9BUB4 502 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR52D1Q9H346 318 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 FGF20Q9NP95 211 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RPRMQ9NS64 109 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ACER3Q9NUN7 267 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF629Q9UEG4 869 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CACFD1Q9UGQ2 172 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SIGLEC7Q9Y286 467 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF443Q9Y2A4 671 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 C3P01024 1663 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 DNMT1P26358 1616 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LRRC9Q6ZRR7 1453 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 IGLV3-10A0A075B6K4 115 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 KLF18A0A0U1RQI7 1052 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LOC107984640A0A0U1RRK4 108 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 A0A1B0GW64 132 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TCRBV9S1A1TA0A576 114 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 IGLC7A0M8Q6 106 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 C5orf63A6NC05 138 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 FAM231BA6NCW3 169 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 B4DEV8 164 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TNFRSF11BO00300 401 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 GABRPO00591 440 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CDC42EP2O14613 210 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CDS2O95674 445 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 P04436 131 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 FGF1P05230 155 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CSN2P05814 226 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SULT1A3P0DMM9 295 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SULT1A4P0DMN0 295 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CXCL2P19875 107 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 G6PCP35575 357 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 NCS1P62166 190 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SLC35A2P78381 396 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SLC35B1P78383 322 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ST3GAL4Q11206 333 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 FOXF1Q12946 379 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 EBI3Q14213 229 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ARHGAP11BQ3KRB8 267 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TP53I3Q53FA7 332 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LRRC10Q5BKY1 277 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF660Q6AZW8 331 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 MOB1BQ7L9L4 216 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF429Q86V71 674 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 EXOC3-AS1Q8N2X6 119 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 OR52E2Q8NGJ4 325 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 OR10D4PQ8NGN7 298 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 OR10R2Q8NGX6 335 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF564Q8TBZ8 553 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 NDRG1Q92597 394 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SEC22AQ96IW7 307 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 OR11A1Q9GZK7 315 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 NPVFQ9HCQ7 196 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 KCNJ16Q9NPI9 418 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ACOT13Q9NPJ3 140 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 PRNDQ9UKY0 176 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 MRPS16Q9Y3D3 137 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 AK6Q9Y3D8 172 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 HDGFL3Q9Y3E1 203 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 IER3IP1Q9Y5U9 82 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SLIT1O75093 1534 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 KIF26AQ9ULI4 1882 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 SAMD9LQ8IVG5 1584 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TSC2P49815 1807 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 AFDNP55196 1824 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LOC102725191A0A1B0GVB3 256 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LOC107986453A0A1B0GWG9 222 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 MYBPHLA2RUH7 354 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 FABP7O15540 132 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 IGLV1-47P01700 117 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 APOC3P02656 99 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CT45A6P0DMU7 189 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CT45A5P0DMU8 189 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CT45A7P0DMV0 189 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00694P0DN24 101 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CTLA4P16410 223 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ORM2P19652 201 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 NFYBP25208 207 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 NMUP48645 174 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LIM2P55344 173 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TAS2R20P59543 309 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 GABARAPL2P60520 117 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 RPS25P62851 125 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 RPL31P62899 125 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LOXL1Q08397 574 aaPredicted RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms