RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LRBAP50851 2863 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 TRAV3A0A0B4J244 114 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 J3QKU1 62 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 KBTBD11O94819 623 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 FGF2P09038 288 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 HSPE1P61604 102 aaKnown RBP10.11□□□□□ -0.79
SHMT2-233ENST00000557529 RPS16P62249 146 aaKnown RBP10.11□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM267Q0VDI3 215 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-233ENST00000557529 FAM74A1Q5RGS3 127 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 MOB3BQ86TA1 216 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 PUSL1Q8N0Z8 303 aaKnown RBP10.11□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM217Q8N7C4 229 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 MS4A7Q9GZW8 240 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-233ENST00000557529 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 MED9Q9NWA0 146 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 DPM3Q9P2X0 92 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 TCF19Q9Y242 345 aa10.11□□□□□ -0.79
SHMT2-233ENST00000557529 SMG1Q96Q15 3661 aaKnown RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 IFNA5P01569 189 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 SEC11BP0C7V7 166 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 METTL15P1P0C7V9 234 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 SAA1P0DJI8 122 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 PLA2G2AP14555 144 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 S100A1P23297 94 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 DLX1P56177 255 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 TPTE2P1Q5T6R2 138 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 HCP5Q6MZN7 132 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 VMO1Q7Z5L0 202 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM167AQ8TBQ9 72 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 PCNPQ8WW12 178 aaKnown RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 PINX1Q96BK5 328 aaKnown RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 OR4C12Q96R67 309 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 RNF5Q99942 180 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 ENY2Q9NPA8 101 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 FAM208BQ5VWN6 2430 aa10.1□□□□□ -0.79
SHMT2-233ENST00000557529 KMT2BQ9UMN6 2715 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-233ENST00000557529 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 OOSP1A8MZH6 123 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 FGF16O43320 207 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 SPP1P10451 314 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 VDAC2P45880 294 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 HOXA1P49639 335 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 DVL1P1P54792 670 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 PRB3Q04118 309 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 AKAP6Q13023 2319 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 MINOS1Q5TGZ0 78 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 LILRB2Q8N423 598 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 PERPQ96FX8 193 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 HEYLQ9NQ87 328 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-233ENST00000557529 PFDN2Q9UHV9 154 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 MINOS1-NBL1R4GNA1 71 aa10.09□□□□□ -0.79
SHMT2-233ENST00000557529 IGHV4-61A0A0C4DH41 118 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 FBXO24O75426 580 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 TOX4O94842 621 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 IGLV2-23P01705 113 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 HOXB4P17483 251 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SULT1A2P50226 295 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 ATP5IP56385 69 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-233ENST00000557529 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
SHMT2-233ENST00000557529 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SLC38A11Q08AI6 406 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 KLRD1Q13241 179 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SPINK9Q5DT21 86 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 CCDC144NLQ6NUI1 221 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SLC25A24Q6NUK1 477 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 HSD17B11Q8NBQ5 300 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 OR10P1Q8NGE3 313 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SCGB1C1Q8TD33 95 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 SAT2Q96F10 170 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-233ENST00000557529 PARD6GQ9BYG4 376 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-233ENST00000557529 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 MMP26Q9NRE1 261 aa10.08□□□□□ -0.8
SHMT2-233ENST00000557529 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 IFNA10P01566 189 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 FAM157CP0CG43 387 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 SLC25A16P16260 332 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 CD1BP29016 333 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 RAB5CP51148 216 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 LGALS4P56470 323 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 BLOC1S1P78537 153 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 HAPLN4Q86UW8 402 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms