RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ARL3P36405 182 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 UBE2UQ5VVX9 321 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 SSX9Q7RTT3 188 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 MMD2Q8IY49 270 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 NECAP1Q8NC96 275 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 OR52B4Q8NGK2 314 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 OSR1Q8TAX0 266 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-210ENST00000557431 FANCD2OSQ96PS1 177 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 NDUFB11Q9NX14 153 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 UBQLN2Q9UHD9 624 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
SLIRP-210ENST00000557431 IGKV1D-13A0A0B4J2D9 117 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 IGKV1-13P0DP09 117 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 TM4SF20Q53R12 229 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF57Q68EA5 555 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-210ENST00000557431 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 UXS1Q8NBZ7 420 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 ADTRPQ96IZ2 230 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 SPIN2AQ99865 258 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 SPIN2BQ9BPZ2 258 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 GGTLC1Q9BX51 225 aa10.52□□□□□ -0.73
SLIRP-210ENST00000557431 DNAH10Q8IVF4 4471 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 LOC102724200A0A096LPH7 203 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-210ENST00000557431 TRDV1A0A1B0GX56 115 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 MFSD2BA6NFX1 497 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 IGLV2-14P01704 120 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 RPL27AP46776 148 aaKnown RBP10.51□□□□□ -0.73
SLIRP-210ENST00000557431 UNQ9165/PRO28630Q6UXU0 137 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF645Q8N7E2 425 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 OR51E2Q9H255 320 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 TECRQ9NZ01 308 aaKnown RBP10.51□□□□□ -0.73
SLIRP-210ENST00000557431 SPATA2Q9UM82 520 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
SLIRP-210ENST00000557431 TRAV1-2A0A0B4J238 106 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 DPPA5A6NC42 116 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 LGALS9O00182 355 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 DEDDO75618 318 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 KBTBD11O94819 623 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 GALP22466 123 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 GADD45AP24522 165 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 PSMB9P28065 219 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 TALDO1P37837 337 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 PSMD7P51665 324 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 BRWD1-AS2P59051 145 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 DEFB135Q30KP9 77 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF773Q6PK81 442 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 TCTEX1D2Q8WW35 142 aa10.5□□□□□ -0.73
SLIRP-210ENST00000557431 RBMX2Q9Y388 322 aaKnown RBP10.5□□□□□ -0.73
SLIRP-210ENST00000557431 KCTD21Q4G0X4 260 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 LYG2Q86SG7 212 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 PUSL1Q8N0Z8 303 aaKnown RBP10.49□□□□□ -0.73
SLIRP-210ENST00000557431 NUDCD2Q8WVJ2 157 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
SLIRP-210ENST00000557431 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 A8MWP6 167 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 PDCD5O14737 125 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 TNFSF12O43508 249 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-210ENST00000557431 S1PR2O95136 353 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF735P0CB33 412 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 PTHLHP12272 177 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 PSMB6P28072 239 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 FGF9P31371 208 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-210ENST00000557431 GPR183P32249 361 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 RANBP1P43487 201 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 ZNF585BQ52M93 769 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 C22orf42Q6IC83 251 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 SLC25A42Q86VD7 318 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 NR2C2APQ86WQ0 139 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 EEF1AKMT3Q96AZ1 226 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 OR2A7Q96R45 310 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 SLC2A9Q9NRM0 540 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 MRPS7Q9Y2R9 242 aaKnown RBP10.48□□□□□ -0.73
SLIRP-210ENST00000557431 PRELID3BQ9Y3B1 194 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 OR2W1Q9Y3N9 320 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 AGRNO00468 2067 aa10.48□□□□□ -0.73
SLIRP-210ENST00000557431 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 IFITM5A6NNB3 132 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 DIRAS3O95661 229 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 HLA-DQB1P01920 261 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 RPA2P15927 270 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 CD36P16671 472 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 CTRB1P17538 263 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
SLIRP-210ENST00000557431 MYL9P24844 172 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 EIF4EBP1Q13541 118 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-210ENST00000557431 CDNFQ49AH0 187 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 FAM106AQ4KMX7 169 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 FAM209BQ5JX69 171 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 CTRB2Q6GPI1 263 aa10.47□□□□□ -0.73
SLIRP-210ENST00000557431 TXNL4BQ9NX01 149 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms