RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 AESQ08117 197 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 LY6EQ16553 131 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 KRBOX4Q5JUW0 171 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
SHMT2-230ENST00000557427 GALMQ96C23 342 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 SSX3Q99909 188 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 NCOR1P1Q9H4R4 102 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
SHMT2-230ENST00000557427 U3KQK5 164 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 LCE6AA0A183 80 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 hADV38S2A0JD32 116 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 C17orf98A8MV24 154 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 MGST3O14880 152 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 IGLV2-14P01704 120 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 ARG1P05089 322 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 SLC25A6P12236 298 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
SHMT2-230ENST00000557427 CEACAM6P40199 344 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 MEF2CQ06413 473 aaPredicted RBP10□□□□□ -0.81
SHMT2-230ENST00000557427 NMSQ5H8A3 153 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 LHFPL4Q7Z7J7 247 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 BEND2Q8NDZ0 799 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 OR1L1Q8NH94 360 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 AJUBAQ96IF1 538 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 ZNF714Q96N38 554 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
SHMT2-230ENST00000557427 H3BUX3 64 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 SCGB1D2O95969 90 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 HBZP02008 142 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 P2RY1P47900 373 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 GLIPR1P48060 266 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 RAB13P51153 203 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 HTD2P86397 168 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 THOC7Q6I9Y2 204 aaKnown RBP9.99□□□□□ -0.81
SHMT2-230ENST00000557427 FOXRED2Q8IWF2 684 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 BAP18Q8IXM2 172 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 PRR18Q8N4B5 295 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 OR4F17Q8NGA8 305 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 OR52M1Q8NGK5 317 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 OR13D1Q8NGV5 346 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
SHMT2-230ENST00000557427 OR4F4Q96R69 305 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-230ENST00000557427 MEGF9Q9H1U4 602 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 LIN7CQ9NUP9 197 aaKnown RBP9.99□□□□□ -0.81
SHMT2-230ENST00000557427 PFDN2Q9UHV9 154 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
SHMT2-230ENST00000557427 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
SHMT2-230ENST00000557427 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 SPINT2O43291 252 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 GAPDHP04406 335 aaKnown RBP9.98□□□□□ -0.81
SHMT2-230ENST00000557427 IGHV1-8P0DP01 117 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 CD33P20138 364 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 GZMHP20718 246 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 AANATQ16613 207 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 NDUFA11Q86Y39 141 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 DRAM1Q8N682 238 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 ZNF645Q8N7E2 425 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 OR13A1Q8NGR1 328 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 OR5R1Q8NH85 324 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
SHMT2-230ENST00000557427 CXorf58Q96LI9 332 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 C11orf1Q9H5F2 150 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
SHMT2-230ENST00000557427 RCL1Q9Y2P8 373 aaKnown RBP9.98□□□□□ -0.81
SHMT2-230ENST00000557427 A0A1B0GU03 582 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 ODAMA1E959 279 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 FGF16O43320 207 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 TNFSF12O43508 249 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 FBXO24O75426 580 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 MMP23AO75900 390 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 SERPINE2P07093 398 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 OR8U9P0C7N5 309 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 P2RX3P56373 397 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 ID3Q02535 119 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 GNMTQ14749 295 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 SSX2Q16385 188 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 LRRC75BQ2VPJ9 315 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 TCF23Q7RTU1 214 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 DYNAPQ8N1N2 210 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 DMBX1Q8NFW5 382 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 OR52L2PQ8NGH6 319 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 OR8U1Q8NH10 309 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 UBALD1Q8TB05 177 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 WIPF2Q8TF74 440 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 ARL11Q969Q4 196 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 GPHA2Q96T91 129 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 PARP12Q9H0J9 701 aaKnown RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms