RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TPSG1Q9NRR2 321 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
VPS33B-206ENST00000557358 ARPC1BO15143 372 aaKnown RBP10.77□□□□□ -0.69
VPS33B-206ENST00000557358 TNFSF12O43508 249 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 OR2A4O95047 310 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 SAA1P0DJI8 122 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-206ENST00000557358 NAT1P18440 290 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 HLA-DMAP28067 261 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 RFX2P48378 723 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 ERVK-16P61578 105 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 RUNX1Q01196 453 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 ZNF616Q08AN1 781 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 DEFB136Q30KP8 78 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 AADACL3Q5VUY0 350 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 ZNF57Q68EA5 555 aaPredicted RBP10.77□□□□□ -0.69
VPS33B-206ENST00000557358 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 ETV3LQ6ZN32 361 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 SLC25A42Q86VD7 318 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 MYOZ3Q8TDC0 251 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 DUX3Q96PT4 197 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 OR2A7Q96R45 310 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 KLK15Q9H2R5 256 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 FBXO7Q9Y3I1 522 aa10.77□□□□□ -0.69
VPS33B-206ENST00000557358 TNCP24821 2201 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
VPS33B-206ENST00000557358 RBFOX2O43251 390 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS33B-206ENST00000557358 WIPF1O43516 503 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 CRYGBP07316 175 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
VPS33B-206ENST00000557358 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-206ENST00000557358 HRH1P35367 487 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 MAS1LP35410 378 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 TAS2R19P59542 299 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 AP3S2P59780 193 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 TOMM5Q8N4H5 51 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 OR5T1Q8NG75 326 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 OR51H1Q8NH63 302 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 SRSF12Q8WXF0 261 aaKnown RBP10.76□□□□□ -0.69
VPS33B-206ENST00000557358 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 RHOVQ96L33 236 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 MS4A10Q96PG2 267 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 OR5B12Q96R08 314 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 COA4Q9NYJ1 87 aa10.76□□□□□ -0.69
VPS33B-206ENST00000557358 MSGN1A6NI15 193 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 KBTBD11O94819 623 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 HPRT1P00492 218 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 IGLV2-14P01704 120 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 NQO2P16083 231 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 TBPP20226 339 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 RPL30P62888 115 aaKnown RBP10.75□□□□□ -0.69
VPS33B-206ENST00000557358 PJVKQ0ZLH3 352 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 DCTN2Q13561 401 aaKnown RBP10.75□□□□□ -0.69
VPS33B-206ENST00000557358 KLF9Q13886 244 aaPredicted RBP10.75□□□□□ -0.69
VPS33B-206ENST00000557358 C19orf54Q5BKX5 351 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 C9orf66Q5T8R8 295 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 DMBX1Q8NFW5 382 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 HRASLSQ9HDD0 168 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 PALMDQ9NP74 551 aa10.75□□□□□ -0.69
VPS33B-206ENST00000557358 LINC01619G3V211 115 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 I3L521 148 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 GPR31O00270 319 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 DHFRP00374 187 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 CD3DP04234 171 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 HSPB1P04792 205 aaKnown RBP10.74□□□□□ -0.69
VPS33B-206ENST00000557358 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 FAUP35544 74 aaKnown RBP10.74□□□□□ -0.69
VPS33B-206ENST00000557358 TAS2R31P59538 309 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 RNASE10Q5GAN6 216 aaKnown RBP10.74□□□□□ -0.69
VPS33B-206ENST00000557358 STEAP1BQ6NZ63 245 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 LYSMD2Q8IV50 215 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 DEDD2Q8WXF8 326 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 USMG5Q96IX5 58 aa10.74□□□□□ -0.69
VPS33B-206ENST00000557358 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
VPS33B-206ENST00000557358 SEC14L6B5MCN3 397 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 SOX15O60248 233 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 RAMP3O60896 148 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 RAB3DO95716 219 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 IGHV3-11P01762 117 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 CD74P04233 296 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 ZP3P21754 424 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
VPS33B-206ENST00000557358 INSL3P51460 131 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 RPL8P62917 257 aaKnown RBP10.73□□□□□ -0.69
VPS33B-206ENST00000557358 IFITM3Q01628 133 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 EIF4EBP1Q13541 118 aaPredicted RBP10.73□□□□□ -0.69
VPS33B-206ENST00000557358 FHL3Q13643 280 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 FAM209BQ5JX69 171 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 SSX9Q7RTT3 188 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 SLC38A6Q8IZM9 456 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 TMEM167AQ8TBQ9 72 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms