RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 RPL27AP46776 148 aaKnown RBP8.85□□□□□ -0.99
PSEN1-220ENST00000557037 FAM3BP58499 235 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-220ENST00000557037 HLA-DRB3P79483 266 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 TMEM88Q6PEY1 159 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 Q6ZSN1 163 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 OR8J1Q8NGP2 316 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 CCDC124Q96CT7 223 aaKnown RBP8.85□□□□□ -0.99
PSEN1-220ENST00000557037 HDHD3Q9BSH5 251 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-220ENST00000557037 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 AASSQ9UDR5 926 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 TAGLN3Q9UI15 199 aa8.85□□□□□ -0.99
PSEN1-220ENST00000557037 TRAV8-7A0A075B6U6 113 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 IGKV1-6A0A0C4DH72 117 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 CHEK1O14757 476 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 IGFBP3P17936 291 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-220ENST00000557037 PSMD7P51665 324 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 GBX2P52951 348 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-220ENST00000557037 PLA2G7Q13093 441 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 TMEM41BQ5BJD5 291 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 ZNF66Q6ZN08 573 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 VKORC1L1Q8N0U8 176 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 FAM24BQ8N5W8 94 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 OR6M1Q8NGM8 313 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 CMTM3Q96MX0 182 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 DCUN1D5Q9BTE7 237 aa8.84□□□□□ -0.99
PSEN1-220ENST00000557037 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 KNCNA6PVL3 124 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
PSEN1-220ENST00000557037 K7EMT4 169 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 RAB27BO00194 218 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 NDUFA4O00483 81 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 ZNF735P0CB33 412 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 TPBGQ13641 420 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 KLK9Q2XQG4 91 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 OR2G6Q5TZ20 316 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 TRPT1Q86TN4 253 aaKnown RBP8.83□□□□□ -1
PSEN1-220ENST00000557037 SYS1Q8N2H4 156 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 OSR1Q8TAX0 266 aaPredicted RBP8.83□□□□□ -1
PSEN1-220ENST00000557037 NRBF2Q96F24 287 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
PSEN1-220ENST00000557037 IMPAD1Q9NX62 359 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 SMPD3Q9NY59 655 aaPredicted RBP8.83□□□□□ -1
PSEN1-220ENST00000557037 PTTG2Q9NZH5 202 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 KLK9Q9UKQ9 250 aa8.83□□□□□ -1
PSEN1-220ENST00000557037 TRBV5-7A0A0A0MS05 114 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 LINC00473A8K010 186 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 FKBP6O75344 327 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 CD3GP09693 182 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 SPP1P10451 314 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 PTBP1P26599 531 aaKnown RBP eCLIP8.82□□□□□ -1
PSEN1-220ENST00000557037 HAMPP81172 84 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 OR10K2Q6IF99 312 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 LGALS12Q96DT0 336 aa8.82□□□□□ -1
PSEN1-220ENST00000557037 IGHV3-21A0A0B4J1V1 117 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 A0A1W2PPK0 400 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 DNASE2O00115 360 aaPredicted RBP8.81□□□□□ -1
PSEN1-220ENST00000557037 PAFAH1B2P68402 229 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 FAM90A2PQ658T7 463 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 XAF1Q6GPH4 301 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 TCF24Q7RTU0 167 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 OR51E2Q9H255 320 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 CKLFQ9UBR5 152 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 AK3Q9UIJ7 227 aa8.81□□□□□ -1
PSEN1-220ENST00000557037 EXOGQ9Y2C4 368 aaKnown RBP8.81□□□□□ -1
PSEN1-220ENST00000557037 C15orf62A8K5M9 175 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 DFFBO76075 338 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 BTF3P20290 206 aaKnown RBP8.8□□□□□ -1
PSEN1-220ENST00000557037 HTR2CP28335 458 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 DUTP33316 252 aaKnown RBP8.8□□□□□ -1
PSEN1-220ENST00000557037 KRTAP10-1P60331 282 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 MRPL28Q13084 256 aaKnown RBP8.8□□□□□ -1
PSEN1-220ENST00000557037 IRF3Q14653 427 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 OR2B11Q5JQS5 317 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 KDM4DQ6B0I6 523 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 MFSD4AQ8N468 514 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 BSCL2Q96G97 398 aaPredicted RBP8.8□□□□□ -1
PSEN1-220ENST00000557037 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 Q9N2K0 584 aa8.8□□□□□ -1
PSEN1-220ENST00000557037 TRBV6-6A0A0A6YYG2 114 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 FCGR3BO75015 233 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 CRHBPP24387 322 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 ADTRPQ96IZ2 230 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 CIB1Q99828 191 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 NIPSNAP3BQ9BS92 247 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 PLEKHJ1Q9NW61 149 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 ERVK13-1Q9NX77 482 aa8.79□□□□□ -1
PSEN1-220ENST00000557037 AQP12BA6NM10 295 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 BET1O15155 118 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 NUPL2O15504 423 aaKnown RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 KBTBD11O94819 623 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 YIF1AO95070 293 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 MAS1LP35410 378 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms