RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 AADACP22760 399 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 ECSCRQ19T08 205 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 ZNF660Q6AZW8 331 aaPredicted RBP8.03□□□□□ -1.12
SHMT2-224ENST00000556737 OVCH2Q7RTZ1 564 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 ZNF491Q8N8L2 437 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 MARCH1Q8TCQ1 289 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 DDB2Q92466 427 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 SCGB3A2Q96PL1 93 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 SLC25A21Q9BQT8 299 aaPredicted RBP8.03□□□□□ -1.12
SHMT2-224ENST00000556737 SLC35D1Q9NTN3 355 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 METTL1Q9UBP6 276 aaKnown RBP8.03□□□□□ -1.12
SHMT2-224ENST00000556737 FLVCR2Q9UPI3 526 aa8.03□□□□□ -1.12
SHMT2-224ENST00000556737 C14orf166Q9Y224 244 aaKnown RBP8.03□□□□□ -1.12
SHMT2-224ENST00000556737 WI2-2373I1.2A0A1W2PRP0 233 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 SLC25A17O43808 307 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 NDUFB6O95139 128 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 CRYGBP07316 175 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 GNB1P62873 340 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 RUNX1Q01196 453 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 PLGLAQ15195 96 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 MRGPRG-AS1Q2M3A8 158 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 DUSP18Q8NEJ0 188 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 TERB2Q8NHR7 220 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 CASTOR1Q8WTX7 329 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 SECTM1Q8WVN6 248 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 UBE2E2Q96LR5 201 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 FAM103A1Q9BTL3 118 aaKnown RBP8.02□□□□□ -1.13
SHMT2-224ENST00000556737 GPR61Q9BZJ8 451 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 SLC2A8Q9NY64 477 aa8.02□□□□□ -1.13
SHMT2-224ENST00000556737 FOXA2Q9Y261 457 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-224ENST00000556737 A0A1W2PN81 502 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 LINC00473A8K010 186 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 PPYP01298 95 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 IGLV2-14P01704 120 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 AKR1C4P17516 323 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 DUTP33316 252 aaKnown RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 CHRNA7P36544 502 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 ECI1P42126 302 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 RAB9AP51151 201 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 LUMP51884 338 aaPredicted RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 RPS16P62249 146 aaKnown RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 CBX3Q13185 183 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 ZNF562Q6V9R5 426 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 Q6ZNX1 250 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 BVESQ8NE79 360 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 OR13C8Q8NGS7 320 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 ZFAND1Q8TCF1 268 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 GIMAP1Q8WWP7 306 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 FLYWCH2Q96CP2 140 aaKnown RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 HARBI1Q96MB7 349 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 CLCC1Q96S66 551 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 TSNAXQ99598 290 aaKnown RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
SHMT2-224ENST00000556737 SLC5A7Q9GZV3 580 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 FXYD6Q9H0Q3 95 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 VSIG4Q9Y279 399 aa8.01□□□□□ -1.13
SHMT2-224ENST00000556737 IGKV1D-13A0A0B4J2D9 117 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 A0A1B0GVG6 124 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 SRRM4A7MD48 611 aaKnown RBP8□□□□□ -1.13
SHMT2-224ENST00000556737 IGKV1-13P0DP09 117 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 PI3P19957 117 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 ANXA7P20073 488 aaKnown RBP8□□□□□ -1.13
SHMT2-224ENST00000556737 S100GP29377 79 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 PJVKQ0ZLH3 352 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 EIF4EBP1Q13541 118 aaPredicted RBP8□□□□□ -1.13
SHMT2-224ENST00000556737 C4orf46Q504U0 113 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 PHLDA2Q53GA4 152 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 TMEM65Q6PI78 240 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 PPP1R27Q86WC6 154 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 ZNF645Q8N7E2 425 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 LFNGQ8NES3 379 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 OR11H1Q8NG94 326 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 OR5M8Q8NGP6 311 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 ABHD5Q8WTS1 349 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 ARPC1AQ92747 370 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 MOB3AQ96BX8 217 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 OR5B12Q96R08 314 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 ALX4Q9H161 411 aaPredicted RBP8□□□□□ -1.13
SHMT2-224ENST00000556737 GPN1Q9HCN4 374 aaPredicted RBP8□□□□□ -1.13
SHMT2-224ENST00000556737 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 COL7A1Q02388 2944 aa8□□□□□ -1.13
SHMT2-224ENST00000556737 TEX13DA0A0J9YY54 714 aaPredicted RBP7.99□□□□□ -1.13
SHMT2-224ENST00000556737 TUSC2O75896 110 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 LGALS1P09382 135 aaKnown RBP7.99□□□□□ -1.13
SHMT2-224ENST00000556737 VAMP1P23763 118 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 TAS2R31P59538 309 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 RPL30P62888 115 aaKnown RBP7.99□□□□□ -1.13
SHMT2-224ENST00000556737 TAGLNQ01995 201 aaKnown RBP7.99□□□□□ -1.13
SHMT2-224ENST00000556737 ZNF616Q08AN1 781 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 TATDN3Q17R31 274 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 RTL8BQ17RB0 113 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 AKIRIN2Q53H80 203 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 AADACL3Q5VUY0 350 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 LPCAT3Q6P1A2 487 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 UNQ5815/PRO19632Q6UWF5 114 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 DHRS11Q6UWP2 260 aa7.99□□□□□ -1.13
SHMT2-224ENST00000556737 LHFPL1Q86WI0 220 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms