RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ZNF140P52738 457 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 OR12D2P58182 307 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 LSM6P62312 80 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SELENOWP63302 87 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 FABP5Q01469 135 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SSBP1Q04837 148 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF616Q08AN1 781 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SIGLEC14Q08ET2 396 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 LAMTOR4Q0VGL1 99 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SLC36A2Q495M3 483 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 ACTBL2Q562R1 376 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PYY3Q5JQD4 70 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 UBE2NLQ5JXB2 153 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 NCMAPQ5T1S8 102 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 HENMT1Q5T8I9 393 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 RPL22L1Q6P5R6 122 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 DNM1P34Q6PK57 102 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 LGI3Q8N145 548 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF567Q8N184 647 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 LRRC18Q8N456 261 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 CYB561A3Q8NBI2 242 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PLPP5Q8NEB5 264 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SLC30A7Q8NEW0 376 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 NT5CQ8TCD5 201 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 RNASEH2CQ8TDP1 164 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 THEM6Q8WUY1 208 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 ORAOV1Q8WV07 137 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SMIM4Q8WVI0 70 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 GHSRQ92847 366 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 KCNS1Q96KK3 526 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 FAM19A4Q96LR4 140 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PACRGQ96M98 296 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 STACQ99469 402 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SLC25A21Q9BQT8 299 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 TIMM29Q9BSF4 260 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SNRNP25Q9BV90 132 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 CHRNA10Q9GZZ6 450 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PCBD2Q9H0N5 130 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PRO1933Q9H354 126 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 RERGLQ9H628 205 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 TPT1P8Q9HAU6 139 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 RHOFQ9HBH0 211 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 HRASLSQ9HDD0 168 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM100Q9NV29 134 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 DHCR7Q9UBM7 475 aaKnown RBP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 OPN4Q9UHM6 478 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 VAX2Q9UIW0 290 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PUS1Q9Y606 427 aaKnown RBP eCLIP2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PKD1L3Q7Z443 1732 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 PTPRFP10586 1907 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 SIPA1L1O43166 1804 aa2.75□□□□□ -1.97
PRPF39-210ENST00000556718 BRCA1P38398 1863 aaKnown RBP2.74□□□□□ -1.97
PRPF39-210ENST00000556718 NAV1Q8NEY1 1877 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 TOPAZ1Q8N9V7 1692 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 A0A087WWC5 75 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 BORCS7-ASMTA0A0B4J1R7 106 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 TRAV1-2A0A0B4J238 106 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 A0A1B0GV72 72 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 SLC5A10A0PJK1 596 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 OR5H14A6NHG9 310 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 C9J4A7 227 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 TMEM238C9JI98 176 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 K7EN84 100 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ADAP1O75689 374 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 PMP2P02689 132 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 CSN2P05814 226 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ADRA2AP08913 450 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 CISD3P0C7P0 127 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 SCGB1A1P11684 91 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 FABP4P15090 132 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 GPX2P18283 190 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 NFYBP25208 207 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 PSMB5P28074 263 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 OR10J1P30954 320 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 PRSS3P35030 304 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 OPRK1P41145 380 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 CDC34P49427 236 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-210ENST00000556718 AKR1C2P52895 323 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ACTBP60709 375 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 RPS25P62851 125 aaKnown RBP2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ACTG1P63261 375 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF235Q14590 738 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 TNXAQ16473 311 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 TAF9Q16594 264 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 NCBP2-AS2Q69YL0 99 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 C12orf73Q69YU5 71 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 OR2T2Q6IF00 324 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 FAM71E1Q6IPT2 247 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 Q6P435 159 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 ZNF705AQ6ZN79 300 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-210ENST00000556718 Q6ZR03 302 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-210ENST00000556718 GRINAQ7Z429 371 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 WDR86Q86TI4 376 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 UBALD2Q8IYN6 164 aa2.74□□□□□ -1.97
PRPF39-210ENST00000556718 FAM24BQ8N5W8 94 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms