RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 IGKV1D-12P01611 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IGLV1-44P01699 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 CD8AP01732 235 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 CRYAAP02489 173 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L2P0CJ85 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L3P0CJ86 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L4P0CJ87 422 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L5P0CJ88 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L6P0CJ89 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4L7P0CJ90 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE12FP0CL80 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE12GP0CL81 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE12IP0CL82 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR5H8P0DN80 308 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 ZNF35P13682 527 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 AKR1C4P17516 323 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 CXCL3P19876 107 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 NFYAP23511 347 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 SSTR2P30874 369 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 RBMXP38159 391 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 HERV-K104P61576 105 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SRPXP78539 464 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE1Q13065 139 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE4Q13068 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 LAGE3Q14657 143 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 TIGITQ495A1 244 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 COX19Q49B96 90 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SPIN3Q5JUX0 258 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR2T2Q6IF00 324 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 HAGHLQ6PII5 290 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 GSG1LQ6UXU4 331 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 CALHM1Q8IU99 346 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 C9orf62Q8N4C0 152 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 WDR31Q8NA23 367 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR10AD1Q8NGE0 317 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR13G1Q8NGZ3 307 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SLC25A40Q8TBP6 338 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 NEK7Q8TDX7 302 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 TMED6Q8WW62 240 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 HPSE2Q8WWQ2 592 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 FAAP24Q9BTP7 215 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 ADAT1Q9BUB4 502 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 SUCNR1Q9BXA5 334 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR2J1Q9GZK6 312 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 OR51I2Q9H344 312 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 RETNQ9HD89 108 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 DUX4Q9UBX2 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 ZNF629Q9UEG4 869 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 OPN4Q9UHM6 478 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 AK3Q9UIJ7 227 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 RCL1Q9Y2P8 373 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 SLC25A15Q9Y619 301 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 INTS1Q8N201 2190 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 URB1O60287 2271 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 IGHV2OR16-5A0A0B4J2B6 119 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 OR2AT4A6NND4 320 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 HSD17B6O14756 317 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 DEGS1O15121 323 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 NAPSAO96009 420 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 CECR9P0C854 216 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 PGA5P0DJD9 388 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ZNF728P0DKX0 622 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 SLC25A4P12235 298 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 BCL3P20749 454 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 CA6P23280 308 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 S100A11P31949 105 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ERVS71-1P61550 626 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 IFITM2Q01629 132 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 PPP1R1AQ13522 171 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 OR2F1Q13607 317 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ZNF146Q15072 292 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 PSG5Q15238 335 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 PIGYQ3MUY2 71 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ABCA11PQ4W5N1 156 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 GFRALQ6UXV0 394 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 Q6ZTC4 211 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 OR5T2Q8NGG2 359 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 OR1S2Q8NGQ3 325 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 OR10Z1Q8NGY1 313 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 KLF14Q8TD94 323 aaPredicted RBP4.13□□□□□ -1.75
SRP54-211ENST00000556445 CASTOR1Q8WTX7 329 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 TOMM40LQ969M1 308 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 GALNT14Q96FL9 552 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 RNF2Q99496 336 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 SULT4A1Q9BR01 284 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ZNF2Q9BSG1 426 aaPredicted RBP4.13□□□□□ -1.75
SRP54-211ENST00000556445 SLC25A33Q9BSK2 321 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 CHIAQ9BZP6 476 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 NMES1Q9C002 83 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 RASL12Q9NYN1 266 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 TP53TG5Q9Y2B4 290 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 ZNF835Q9Y2P0 537 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 FAM215AQ9Y5M1 114 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 MUC6Q6W4X9 2439 aa4.13□□□□□ -1.75
SRP54-211ENST00000556445 HEATR1Q9H583 2144 aaKnown RBP4.12□□□□□ -1.75
SRP54-211ENST00000556445 FXYD6-FXYD2A0A087WZ82 144 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms