RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RUNX1Q01196 453 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 IL18Q14116 193 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 PHLDA2Q53GA4 152 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 LPCAT3Q6P1A2 487 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 MCFD2Q8NI22 146 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 TMEM167AQ8TBQ9 72 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 RBM38Q9H0Z9 239 aaKnown RBP11.79□□□□□ -0.52
ACTN1-217ENST00000556203 ALX4Q9H161 411 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-217ENST00000556203 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
ACTN1-217ENST00000556203 RSL24D1Q9UHA3 163 aaKnown RBP11.79□□□□□ -0.52
ACTN1-217ENST00000556203 H3BUA1 57 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 MPPED1O15442 326 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 S1PR2O95136 353 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
ACTN1-217ENST00000556203 NQO2P16083 231 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 TBPP20226 339 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 TAS2R19P59542 299 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 FHL3Q13643 280 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 SMIM4Q8WVI0 70 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 DGCR14Q96DF8 476 aaKnown RBP11.78□□□□□ -0.52
ACTN1-217ENST00000556203 AIFM2Q9BRQ8 373 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
ACTN1-217ENST00000556203 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-217ENST00000556203 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
ACTN1-217ENST00000556203 CTDSPLO15194 276 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-217ENST00000556203 CD74P04233 296 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 F2RP25116 425 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 S100GP29377 79 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 UCP3P55916 312 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 OR4D10Q8NGI6 311 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 SPIN2AQ99865 258 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 SPIN2BQ9BPZ2 258 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.53
ACTN1-217ENST00000556203 RSRP1Q9BUV0 290 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 COA4Q9NYJ1 87 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 BET1LQ9NYM9 111 aa11.77□□□□□ -0.53
ACTN1-217ENST00000556203 RAB3DO95716 219 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 PGAM2P15259 253 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 RPA2P15927 270 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 HLA-GP17693 338 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 TNFSF8P32971 234 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 MAS1LP35410 378 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 ERVK-16P61578 105 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF616Q08AN1 781 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 STEAP1BQ6NZ63 245 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 TBC1D26Q86UD7 250 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 LHFPL1Q86WI0 220 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 ADAD2Q8NCV1 583 aaKnown RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 DMBX1Q8NFW5 382 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 DPF1Q92782 380 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
ACTN1-217ENST00000556203 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 NOTCH3Q9UM47 2321 aa11.76□□□□□ -0.53
ACTN1-217ENST00000556203 C13orf42A0A1B0GVH6 325 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 FABP12A6NFH5 140 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 HMX3A6NHT5 357 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 E7EUB6 86 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-217ENST00000556203 BRI3O95415 125 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 MYOD1P15172 320 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 LPAR6P43657 344 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 PPP5CP53041 499 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 DEFA5Q01523 94 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 SCGB2B2Q4G0G5 96 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 GPR61Q9BZJ8 451 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
ACTN1-217ENST00000556203 IGHV4OR15-8A0A075B7B6 117 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 A0A087WW49 117 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 A0A1B0GW64 132 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 MARCH11A6NNE9 402 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 TEX22C9J3V5 150 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 LINC01619G3V211 115 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 UPK2O00526 184 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 PRH1P02810 166 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-217ENST00000556203 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 PI3P19957 117 aa11.74□□□□□ -0.53
ACTN1-217ENST00000556203 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms