RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF205O95201 554 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF841Q6ZN19 808 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 GUCD1Q96NT3 240 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 C17orf100A8MU93 164 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 NPFFO15130 113 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 HTN1P15515 57 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 MPZP25189 248 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF137PP52743 207 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 HCP5Q6MZN7 132 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 SGK494Q96LW2 274 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 KIAA1217Q5T5P2 1943 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 CBLN4Q9NTU7 201 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 PIN1P1O15428 100 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 HYAL3O43820 417 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-216ENST00000556083 THY1P04216 161 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 ACSF3Q4G176 576 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-216ENST00000556083 AMELYQ99218 206 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM74BQ9NUR3 256 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TRAV39A0A0B4J263 110 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TRAV34A0A0B4J273 112 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TRAV20A0A0B4J274 112 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TRGV3P03979 118 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 GLIPR1P48060 266 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 TEX45Q8NA69 505 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 FDCSPQ8NFU4 85 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 IL17BQ9UHF5 180 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 CEACAM4O75871 244 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 PPBPP02775 128 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 CECR9P0C854 216 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 CXCL2P19875 107 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 CCL1P22362 96 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF826PQ6ZT77 177 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 OR11H1Q8NG94 326 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 OR11H2Q8NH07 326 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 SRSF12Q8WXF0 261 aaKnown RBP9.1□□□□□ -0.95
ACTN1-216ENST00000556083 PRSS22Q9GZN4 317 aa9.1□□□□□ -0.95
ACTN1-216ENST00000556083 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
ACTN1-216ENST00000556083 IGKV3-7A0A075B6H7 116 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 A0A087WWC5 75 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 IGHV2OR16-5A0A0B4J2B6 119 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 A0A1W2PPE3 182 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 CDX1P47902 265 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-216ENST00000556083 EGR4Q05215 589 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 ASPHD2Q6ICH7 369 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM144Q7Z5S9 345 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 ISOC2Q96AB3 205 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 MCM3APO60318 1980 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 MEX3AA1L020 520 aaKnown RBP9.09□□□□□ -0.95
ACTN1-216ENST00000556083 ZG16O60844 167 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 DNAL4O96015 105 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 IL4P05112 153 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 CELA2AP08217 269 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 DTX2Q86UW9 622 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 CBLN2Q8IUK8 224 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 VN1R17PQ8TDU5 208 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 NPIPB3Q92617 1050 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 SPTA1P02549 2419 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 TMSB15BA0A087X1C1 80 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 SSTR5P35346 364 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 LEPP41159 167 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 PRSS12P56730 875 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 RUNX1Q01196 453 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 GPR61Q9BZJ8 451 aa9.09□□□□□ -0.95
ACTN1-216ENST00000556083 NMUP48645 174 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 PPP1R27Q86WC6 154 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TPRX1Q8N7U7 411 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 ARPC1AQ92747 370 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 LMX1BO60663 402 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 RCC1P18754 421 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TIMP3P35625 211 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 NCMAPQ5T1S8 102 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF818PQ6ZRF7 136 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 NUDT10Q8NFP7 164 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 SOSTQ9BQB4 213 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 HSPB9Q9BQS6 159 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 RPRMQ9NS64 109 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 PRR13Q9NZ81 148 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 C12orf77C9JDV5 145 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 PRSS8Q16651 343 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TLNRD1Q9H1K6 362 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TDRD15B5MCY1 1934 aaKnown RBP9.08□□□□□ -0.96
ACTN1-216ENST00000556083 PCM1Q15154 2024 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 APC2O95996 2303 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 IGKV3D-15A0A087WSY6 115 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 CACNG7P62955 275 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 TGIF1Q15583 401 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 OR52E5Q8NH55 327 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 MRAP2Q96G30 205 aa9.08□□□□□ -0.96
ACTN1-216ENST00000556083 SCN10AQ9Y5Y9 1956 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms