RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 HOXA1P49639 335 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 AVPI1Q5T686 147 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 CENPVQ7Z7K6 275 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 DTX2Q86UW9 622 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 C11orf42Q8N5U0 333 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 OR5AN1Q8NGI8 311 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 SFT2D1Q8WV19 159 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 TNFRSF14Q92956 283 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 NKX6-2Q9C056 277 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 ENY2Q9NPA8 101 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 FKBP11Q9NYL4 201 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 TCF19Q9Y242 345 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 CACNA1AO00555 2505 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 HCFC1P51610 2035 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 hCG_1809904A0A1W2PP81 198 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 A0A1W2PPE2 198 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 A0A1W2PR64 198 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 A0A1W2PRV1 198 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 H0YJW9 148 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 SNAPINO95295 136 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 ZNF137PP52743 207 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 RAB11AP62491 216 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 SPSB3Q6PJ21 355 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 OR4C13Q8NGP0 309 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 LHX4Q969G2 390 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 FLYWCH2Q96CP2 140 aaKnown RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 BET1LQ9NYM9 111 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 KIAA1456Q9P272 454 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 ZNF257Q9Y2Q1 563 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 OR51B2Q9Y5P1 312 aa8.23□□□□□ -1.09
EFCAB11-209ENST00000556005 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 PPIAL4CA0A0B4J2A2 164 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 A0A1B0GV50 99 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 C17orf112F2Z3M2 114 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 UPK2O00526 184 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 MBP02144 154 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 RBP4P02753 201 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 PPIAL4GP0DN37 164 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 FGF7P21781 194 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 PRRX1P54821 245 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 GUCA2BQ16661 112 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 TMEM177Q53S58 311 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 TMEM41BQ5BJD5 291 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 WDR25Q64LD2 544 aaPredicted RBP8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 ATRAIDQ6UW56 229 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 ETV3LQ6ZN32 361 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 PDPNQ86YL7 162 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 ZNF709Q8N972 641 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 C8orf46Q8TAG6 207 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 ST6GALNAC6Q969X2 333 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 PCGF1Q9BSM1 259 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 SCRT1Q9BWW7 348 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 CHODLQ9H9P2 273 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 RPRMQ9NS64 109 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
EFCAB11-209ENST00000556005 RBFOX3A6NFN3 312 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 SRRM4A7MD48 611 aaKnown RBP8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 C9JQL5 133 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 KBTBD11O94819 623 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 CD1BP29016 333 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 MC5RP33032 325 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 REG1BP48304 166 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 PPT1P50897 306 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 RAB13P51153 203 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 RPS16P62249 146 aaKnown RBP8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 CCL20P78556 96 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 SP5Q6BEB4 398 aaPredicted RBP8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 TGIF2LXQ8IUE1 241 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 VSTM2AQ8TAG5 236 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 FAM122AQ96E09 287 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 HARBI1Q96MB7 349 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 NABP2Q9BQ15 211 aa8.21□□□□□ -1.09
EFCAB11-209ENST00000556005 ABCA4P78363 2273 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 IGHV2-26A0A0B4J1V2 119 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 RRHO14718 337 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 LY6HO94772 140 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 IFNA4P05014 189 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 SAA1P0DJI8 122 aaPredicted RBP8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 OR5B3Q8NH48 314 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 OR4A5Q8NH83 315 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 NPCDR1Q9BY65 106 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 VSIRQ9H7M9 311 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 WASHC3Q9Y3C0 194 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 DOCK11Q5JSL3 2073 aa8.21□□□□□ -1.1
EFCAB11-209ENST00000556005 TPRP12270 2363 aaKnown RBP8.2□□□□□ -1.1
EFCAB11-209ENST00000556005 SOX15O60248 233 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms