RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ZNF318Q5VUA4 2279 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 DMXL2Q8TDJ6 3036 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 OR10J1P30954 320 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 HTD2P86397 168 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 SSPNQ14714 243 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 TIMM9Q9Y5J7 89 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 OR10J4P0C629 311 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 MGST1P10620 155 aaKnown RBP14.79□□□□□ -0.04
RCCD1-204ENST00000555737 TIMP3P35625 211 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 RPL15P61313 204 aaKnown RBP14.79□□□□□ -0.04
RCCD1-204ENST00000555737 ATP6V1FQ16864 119 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 KRTCAP3Q53RY4 240 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 UTF1Q5T230 341 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 MRPL54Q6P161 138 aaKnown RBP14.79□□□□□ -0.04
RCCD1-204ENST00000555737 VHLLQ6RSH7 139 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 FAM216AQ8WUB2 273 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 LINC00470Q9BZP3 86 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 IGKV3D-15A0A087WSY6 115 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 TRBV6-6A0A0A6YYG2 114 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 SMPD2O60906 423 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 MOB3BQ86TA1 216 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 ZCCHC14Q8WYQ9 949 aaKnown RBP14.78□□□□□ -0.04
RCCD1-204ENST00000555737 WISP2O76076 250 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 TNFSF10P50591 281 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 TDGF1P3P51864 188 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 SOX8P57073 446 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 FOXF2Q12947 444 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 FBXW9Q5XUX1 488 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 HIPK2Q9H2X6 1198 aa14.78□□□□□ -0.04
RCCD1-204ENST00000555737 PIGBOS1A0A0B4J2F0 54 aa14.77□□□□□ -0.04
RCCD1-204ENST00000555737 COA6Q5JTJ3 125 aaKnown RBP14.77□□□□□ -0.04
RCCD1-204ENST00000555737 VAMP8Q9BV40 100 aa14.77□□□□□ -0.04
RCCD1-204ENST00000555737 RNASE7Q9H1E1 156 aaKnown RBP14.77□□□□□ -0.04
RCCD1-204ENST00000555737 PPP1R14DQ9NXH3 145 aa14.77□□□□□ -0.04
RCCD1-204ENST00000555737 NAT8BQ9UHF3 227 aa14.77□□□□□ -0.04
RCCD1-204ENST00000555737 FAM90A26D6RGX4 464 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 NTN3O00634 580 aaPredicted RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 CA1P00915 261 aaPredicted RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 CGAP01215 116 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 RPP30P78346 268 aaKnown RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 MRPL49Q13405 166 aaKnown RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 FAM201AQ5SY85 155 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 HES3Q5TGS1 186 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 TREML4Q6UXN2 200 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 BEND2Q8NDZ0 799 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 KLF14Q8TD94 323 aaPredicted RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 NANOS1Q8WY41 292 aaKnown RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 CIB3Q96Q77 187 aaPredicted RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 STRADBQ9C0K7 418 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 PDE6DO43924 150 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 DUSP3P51452 185 aaPredicted RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 C1orf194Q5T5A4 169 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 FAM19A2Q8N3H0 131 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 MBNL3Q9NUK0 354 aaKnown RBP14.77□□□□□ -0.05
RCCD1-204ENST00000555737 TMEM106BQ9NUM4 274 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 CBY1Q9Y3M2 126 aa14.77□□□□□ -0.05
RCCD1-204ENST00000555737 OOEPA6NGQ2 149 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 IGHV3-48P01763 117 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 LBHQ53QV2 105 aaPredicted RBP14.76□□□□□ -0.05
RCCD1-204ENST00000555737 DIRC2Q96SL1 478 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 MGST2Q99735 147 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 WNT10AQ9GZT5 417 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 PKDREJQ9NTG1 2253 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 MLNRO43193 412 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 VENTXO95231 258 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 TPPP2P59282 170 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 ZNRF1Q8ND25 227 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 BCL2L2Q92843 193 aaPredicted RBP14.76□□□□□ -0.05
RCCD1-204ENST00000555737 LRFN3Q9BTN0 628 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 TMEM208Q9BTX3 173 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 RNF114Q9Y508 228 aa14.76□□□□□ -0.05
RCCD1-204ENST00000555737 WNT2P09544 360 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 PDLIM4P50479 330 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 DEFB108BQ8NET1 73 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 OR5AU1Q8NGC0 362 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 HSD17B10Q99714 261 aaKnown RBP14.75□□□□□ -0.05
RCCD1-204ENST00000555737 OR7C2O60412 319 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 CRYBB3P26998 211 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 DNLZQ5SXM8 178 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 Q6ZVH6 145 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 ABI3Q9P2A4 366 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 WDR83OSQ9Y284 106 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 K7EN84 100 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 PRB4P10163 310 aaPredicted RBP14.75□□□□□ -0.05
RCCD1-204ENST00000555737 AMTP48728 403 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 ERVK-16P61578 105 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 DCAF10Q5QP82 559 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 UHRF2Q96PU4 802 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 GOLT1BQ9Y3E0 138 aa14.75□□□□□ -0.05
RCCD1-204ENST00000555737 HCFC1P51610 2035 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 RAB29O14966 203 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 PSG5Q15238 335 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 RNFT1Q5M7Z0 435 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 DMRTA1Q5VZB9 504 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 Q8IYB0 196 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 SGK494Q96LW2 274 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 TP53TG3Q9ULZ0 132 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 SPINT2O43291 252 aa14.74□□□□□ -0.05
RCCD1-204ENST00000555737 RPLP1P05386 114 aaKnown RBP14.74□□□□□ -0.05
RCCD1-204ENST00000555737 ERVK11-1P61568 191 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms