RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 TMEM167AQ8TBQ9 72 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 C15orf40Q8WUR7 153 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 MCRIP2Q9BUT9 160 aaKnown RBP10.62□□□□□ -0.71
SHMT2-219ENST00000555563 SLIRPQ9GZT3 109 aaKnown RBP10.62□□□□□ -0.71
SHMT2-219ENST00000555563 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-219ENST00000555563 COA4Q9NYJ1 87 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 MTFP1Q9UDX5 166 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 CEPT1Q9Y6K0 416 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 GPR31O00270 319 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 PGLYRP1O75594 196 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 S1PR2O95136 353 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 OR4A47Q6IF82 309 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 REC114Q7Z4M0 266 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 CMTM1Q8IZ96 169 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 ADAD2Q8NCV1 583 aaKnown RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 SPIN2AQ99865 258 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 SPIN2BQ9BPZ2 258 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 GPR61Q9BZJ8 451 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 TINAGL1Q9GZM7 467 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 C6orf62Q9GZU0 229 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
SHMT2-219ENST00000555563 TNCP24821 2201 aa10.61□□□□□ -0.71
SHMT2-219ENST00000555563 IGHV4OR15-8A0A075B7B6 117 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 A0A087WW49 117 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 TEX22C9J3V5 150 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 GABARAPH6UMI1 98 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 BRI3O95415 125 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 HPRT1P00492 218 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 CD3DP04234 171 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 OR9G9P0C7N8 305 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 NQO2P16083 231 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 RPL27AP46776 148 aaKnown RBP10.6□□□□□ -0.71
SHMT2-219ENST00000555563 SLURP1P55000 103 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 TAS2R31P59538 309 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
SHMT2-219ENST00000555563 EGFEM1PQ0D2K5 195 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 POU2AF1Q16633 256 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 FCAMRQ8WWV6 532 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 DPF1Q92782 380 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 RSRP1Q9BUV0 290 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 PLEKHA2Q9HB19 425 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 HRASLSQ9HDD0 168 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 COMMD9Q9P000 198 aa10.6□□□□□ -0.71
SHMT2-219ENST00000555563 C13orf42A0A1B0GVH6 325 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 A0A1B0GW64 132 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 E7EUB6 86 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 LINC01619G3V211 115 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
SHMT2-219ENST00000555563 PRH1P02810 166 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 IFNA6P05013 189 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 MYOD1P15172 320 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 HLA-GP17693 338 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 TBPP20226 339 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 MAS1LP35410 378 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
SHMT2-219ENST00000555563 SLC38A6Q8IZM9 456 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 ARRDC1Q8N5I2 433 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 OR4A5Q8NH83 315 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 SMIM4Q8WVI0 70 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 DGCR14Q96DF8 476 aaKnown RBP10.59□□□□□ -0.71
SHMT2-219ENST00000555563 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
SHMT2-219ENST00000555563 TMEM140Q9NV12 185 aa10.59□□□□□ -0.71
SHMT2-219ENST00000555563 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 A0A0G2JLM5 398 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 CCDC160A6NGH7 325 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 MARCH11A6NNE9 402 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 CD74P04233 296 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-219ENST00000555563 RPA2P15927 270 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 F2RP25116 425 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 UCP3P55916 312 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 TAS2R19P59542 299 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 ZNF45Q02386 682 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 IL18Q14116 193 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 C9orf66Q5T8R8 295 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 LPCAT3Q6P1A2 487 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 C19orf35Q6ZS72 473 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 TBC1D26Q86UD7 250 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 LHFPL1Q86WI0 220 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 TMEM229BQ8NBD8 167 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 DMBX1Q8NFW5 382 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 MCFD2Q8NI22 146 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 DCUN1D4Q92564 292 aa10.58□□□□□ -0.72
SHMT2-219ENST00000555563 FYTTD1Q96QD9 318 aaKnown RBP10.58□□□□□ -0.72
SHMT2-219ENST00000555563 NXF2Q9GZY0 626 aaKnown RBP10.58□□□□□ -0.72
SHMT2-219ENST00000555563 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 UPK2O00526 184 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 CTDSPLO15194 276 aa10.57□□□□□ -0.72
SHMT2-219ENST00000555563 RAB3DO95716 219 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms