RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ZFP41Q8N8Y5 198 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 RHOXF1Q8NHV9 184 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 GGHQ92820 318 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 CENPNQ96H22 339 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 CXorf58Q96LI9 332 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 DERL3Q96Q80 235 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 KCNK15Q9H427 330 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 C12orf4Q9NQ89 552 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 SLC2A9Q9NRM0 540 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 IGLV11-55A0A075B6I3 123 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 IGLV2-18A0A075B6J9 118 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 A0A1B0GW64 132 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 LINC00473A8K010 186 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 TRDCB7Z8K6 153 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 CTSDP07339 412 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 RBMY1A1P0DJD3 496 aaKnown RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 RBMY1CP0DJD4 496 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 HIST1H1BP16401 226 aaKnown RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 DUTP33316 252 aaKnown RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 RBMY1FQ15415 496 aaKnown RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 PLET1Q6UQ28 207 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 ZNF502Q8TBZ5 544 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 ADTRPQ96IZ2 230 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 FGF20Q9NP95 211 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 ORC6Q9Y5N6 252 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 IGHV4-28A0A0C4DH34 117 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 EI24O14681 340 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 BET1O15155 118 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 SOCS1O15524 211 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 ZNF735P0CB33 412 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 RPA2P15927 270 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 RPL27AP46776 148 aaKnown RBP6.98□□□□□ -1.29
SCFD1-215ENST00000555259 OR6M1Q8NGM8 313 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 OR4A4PQ8NGN8 299 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 CHRDL1Q9BU40 450 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
SCFD1-215ENST00000555259 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 C15orf61A6NNL5 157 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 TMEM14DPA8MWL7 114 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 REG1AP05451 166 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 DEFA4P12838 97 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 DCKP27707 260 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 CMC4P56277 68 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-215ENST00000555259 QRFPP83859 136 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 IGSF11Q5DX21 431 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 Q6ZRM9 215 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 SSX9Q7RTT3 188 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 VKORC1L1Q8N0U8 176 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 CENPSQ8N2Z9 138 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 APH1BQ8WW43 257 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 DCUN1D5Q9BTE7 237 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 NDUFAF3Q9BU61 184 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 LPAR5Q9H1C0 372 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 OR51E2Q9H255 320 aa6.97□□□□□ -1.29
SCFD1-215ENST00000555259 MYCBP2O75592 4640 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.29
SCFD1-215ENST00000555259 TRBV6-7A0A0A0MS04 114 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 PNMA8CA0A1B0GUJ8 204 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 FABP7O15540 132 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 TGOLN2O43493 480 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 MRPS14O60783 128 aaKnown RBP6.96□□□□□ -1.29
SCFD1-215ENST00000555259 FCGR3BO75015 233 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 KBTBD11O94819 623 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 IFNA10P01566 189 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 MIFP14174 115 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 TFPI2P48307 235 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 IRF3Q14653 427 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 C1orf134Q5TEV5 83 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 OR10J5Q8NHC4 309 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.29
SCFD1-215ENST00000555259 RNF2Q99496 336 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 CMSS1Q9BQ75 279 aaKnown RBP6.96□□□□□ -1.29
SCFD1-215ENST00000555259 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 SCRT1Q9BWW7 348 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 CLEC2DQ9UHP7 191 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 HSF4Q9ULV5 492 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 RBM7Q9Y580 266 aaKnown RBP6.96□□□□□ -1.29
SCFD1-215ENST00000555259 ETV7Q9Y603 341 aa6.96□□□□□ -1.29
SCFD1-215ENST00000555259 IGHV3OR16-8A0A075B7F1 116 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 FOXI3A8MTJ6 420 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 ZNF207O43670 478 aaKnown RBP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 CD74P04233 296 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 CELP19835 753 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 PTBP1P26599 531 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 MAS1LP35410 378 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 PSMD7P51665 324 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 TMEM50BP56557 158 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 ARFRP1Q13795 201 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 C1orf100Q5SVJ3 147 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 TTC23Q5W5X9 447 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 ZNF485Q8NCK3 441 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 CCDC197Q8NCU1 140 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 VSTM2AQ8TAG5 236 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 ARHGAP5-AS1Q96IT6 56 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms