RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FOXL1Q12952 345 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 CATR1Q13166 79 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 EBI3Q14213 229 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 HNF4GQ14541 408 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 MMDQ15546 238 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 TMEM268Q5VZI3 342 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 PDPNQ86YL7 162 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 SLC35G3Q8N808 338 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 OR5AN1Q8NGI8 311 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 OR2T6Q8NHC8 308 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 IL22RA2Q969J5 263 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 C2orf50Q96LR7 162 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 PRSS22Q9GZN4 317 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 FAM212BQ9NTI7 297 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-218ENST00000555213 SLC35D1Q9NTN3 355 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
SHMT2-218ENST00000555213 C13orf42A0A1B0GVH6 325 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 NCBP2LA6PVI3 153 aaKnown RBP8.7□□□□□ -1.02
SHMT2-218ENST00000555213 H0YIZ8 118 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 FGF16O43320 207 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 PITX3O75364 302 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 NOXA1Q86UR1 476 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 Q8N6K4 173 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 OR2T35Q8NGX2 323 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 TCTEX1D2Q8WW35 142 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 GPR146Q96CH1 333 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 MDFIQ99750 246 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 RNF5Q99942 180 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 NMES1Q9C002 83 aa8.7□□□□□ -1.02
SHMT2-218ENST00000555213 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 NBR2O15453 112 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 IL6RP08887 468 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-218ENST00000555213 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 IZUMO4Q1ZYL8 232 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 C11orf88Q6PI97 169 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 GSG1LQ6UXU4 331 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 ZNF695Q8IW36 515 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 SPAG16Q8N0X2 631 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 TCTEX1D1Q8N7M0 179 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 OR4S2Q8NH73 311 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 ASB13Q8WXK3 278 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 RBPMSQ93062 196 aaKnown RBP8.69□□□□□ -1.02
SHMT2-218ENST00000555213 FLYWCH2Q96CP2 140 aaKnown RBP8.69□□□□□ -1.02
SHMT2-218ENST00000555213 TSNAXQ99598 290 aaKnown RBP8.69□□□□□ -1.02
SHMT2-218ENST00000555213 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 TMED3Q9Y3Q3 217 aa8.69□□□□□ -1.02
SHMT2-218ENST00000555213 DUXBA0A1W2PPF3 345 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 FAM25EA8MYX2 175 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 TSPAN9O75954 239 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 S1PR2O95136 353 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 SPDEFO95238 335 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 LYL1P12980 280 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 VDAC1P21796 283 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 EIF2B2P49770 351 aaKnown RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 RPS16P62249 146 aaKnown RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 SRPXP78539 464 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 PLGLAQ15195 96 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 LGALSLQ3ZCW2 172 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 ZFP69Q49AA0 526 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 OR2B11Q5JQS5 317 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 C9orf152Q5JTZ5 239 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 Q6ZSV7 163 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 FAM219AQ8IW50 185 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 ZBTB8BQ8NAP8 495 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 OR4D5Q8NGN0 318 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 PPP1R1CQ8WVI7 109 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 LSM10Q969L4 123 aaKnown RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 HARBI1Q96MB7 349 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 C11orf1Q9H5F2 150 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
SHMT2-218ENST00000555213 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
SHMT2-218ENST00000555213 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 SRRM4A7MD48 611 aaKnown RBP8.67□□□□□ -1.02
SHMT2-218ENST00000555213 SHOXO15266 292 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
SHMT2-218ENST00000555213 FCGR3BO75015 233 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 MPC2O95563 127 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 CRYZL1O95825 349 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 MBPP02686 304 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-218ENST00000555213 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 SERPINE2P07093 398 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 SLC25A4P12235 298 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 RPA2P15927 270 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 PSMB6P28072 239 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 VDAC2P45880 294 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-218ENST00000555213 LGALS7P47929 136 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 RELBQ01201 579 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 ID3Q02535 119 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 IAH1Q2TAA2 248 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-218ENST00000555213 FBLN7Q53RD9 439 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 TMEM65Q6PI78 240 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 NPBQ8NG41 125 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms