RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ATP1B3	P54709	279 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	CDC42	P60953	191 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	IL18R1	Q13478	541 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	ATP6AP1	Q15904	470 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	LTC4S	Q16873	150 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	UTS2B	Q765I0	119 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR4X2	Q8NGF9	303 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR51T1	Q8NGJ9	327 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR4D5	Q8NGN0	318 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR13C9	Q8NGT0	318 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR10K1	Q8NGX5	313 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	UBALD1	Q8TB05	177 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PLPPR1	Q8TBJ4	325 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	ZNF596	Q8TC21	504 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PP6455	Q8WZ26	134 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PELI1	Q96FA3	418 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	MBOAT4	Q96T53	435 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PLEKHA1	Q9HB21	404 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	EXOSC4	Q9NPD3	245 aa	Known RBP	3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PLSCR3	Q9NRY6	295 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	WARS2	Q9UGM6	360 aa	Known RBP	3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	KIF25	Q9UIL4	384 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	GNG8	Q9UK08	70 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	MGAT4A	Q9UM21	535 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	PSG11	Q9UQ72	335 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956	TENM2	Q9NT68	2774 aa		3.81	□□□□□ -1.8
PSMC6-208	ENST00000554956		A0A075B6Q4	140 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956		G3V2T6	193 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	TOR1A	O14656	332 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	DEGS1	O15121	323 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	SLC31A2	O15432	143 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GYG2	O15488	501 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GATB	O75879	557 aa	Known RBP	3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	FAM107A	O95990	144 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	IGKV1D-33	P01593	117 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	IGKV1-33	P01594	117 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	IGHG2	P01859	326 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ISG15	P05161	165 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	CSN2	P05814	226 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	PRKACB	P22694	351 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	SSTR5	P35346	364 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	MYCNOS	P40205	109 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GLP1R	P43220	463 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	REG1B	P48304	166 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GNG10	P50151	68 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ZSCAN26	Q16670	478 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	PIGY	Q3MUY2	71 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	SPIN3	Q5JUX0	258 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	LPCAT4	Q643R3	524 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR52W1	Q6IF63	320 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ADAMTSL5	Q6ZMM2	481 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	TMUB2	Q71RG4	321 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	SH2D6	Q7Z4S9	175 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GID4	Q8IVV7	300 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ZNF695	Q8IW36	515 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956		Q8IYB0	196 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ENTHD1	Q8IYW4	607 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	STPG2	Q8N412	459 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956		Q8N6K4	173 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956		Q8N9W7	124 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	KLHL30-AS1	Q8NEE0	82 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR4D6	Q8NGJ1	314 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR51A2	Q8NGJ7	313 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OR9G1	Q8NH87	305 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	CNIH3	Q8TBE1	160 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	DNAJC9	Q8WXX5	260 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	RGP1	Q92546	391 aa	Predicted RBP	3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OPALIN	Q96PE5	141 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	HSPB9	Q9BQS6	159 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	CHRDL1	Q9BU40	450 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	OSBPL10	Q9BXB5	764 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GABARAPL3	Q9BY60	117 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GABARAPL1	Q9H0R8	117 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	GAL3ST2	Q9H3Q3	398 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	LINC00574	Q9H8X3	128 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	ISG20L2	Q9H9L3	353 aa	Known RBP	3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	CALY	Q9NYX4	217 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	MLX	Q9UH92	298 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	HSPE1-MOB4	S4R3N1	261 aa		3.8	□□□□□ -1.8
PSMC6-208	ENST00000554956	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	MEIKIN	A0A087WXM9	373 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	IGHV1-3	A0A0C4DH29	117 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	SERTM2	A0A1B0GWG4	89 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	SNTN	A6NMZ2	147 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	ZNF729	A6NN14	1252 aa	Predicted RBP	3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	SERPINE3	A8MV23	424 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	OOSP1	A8MZH6	123 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956		H0YJX3	145 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	C15orf65	H3BRN8	121 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	BOLA2-SMG1P6	H3BVE0	249 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956		J3QLW9	94 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	WBP4	O75554	376 aa	Known RBP	3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	UBC	P0CG48	685 aa	Known RBP	3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	ZNF19	P17023	458 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	CEACAM3	P40198	252 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	VHL	P40337	213 aa		3.79	□□□□□ -1.8
PSMC6-208	ENST00000554956	RAB25	P57735	213 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms