RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
VTI1B-204ENST00000554659 CA7P43166 264 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 C1QL2Q7Z5L3 287 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 MOB4Q9Y3A3 225 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 SPTA1P02549 2419 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 UCP1P25874 307 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
VTI1B-204ENST00000554659 PSG9Q00887 426 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
VTI1B-204ENST00000554659 A0A087WWC5 75 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 hCG_38984A0A1B0GV85 526 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SMIM13P0DJ93 91 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 GPR6P46095 362 aaPredicted RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 GATAD1Q8WUU5 269 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 METTL26Q96S19 204 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 A1L4Q6 167 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 TGIF1Q15583 401 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SSBP3Q9BWW4 388 aaPredicted RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 DPRXA6NFQ7 191 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 H3BTX0 84 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 DLX6P56179 175 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 CYP2G1PQ6ZSU1 146 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 ATG2BQ96BY7 2078 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 A0A1B0GTI1 187 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SLC25A17O43808 307 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 CBLN1P23435 193 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 CX3CL1P78423 397 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 NR2C2APQ86WQ0 139 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SHISA5Q8N114 240 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
VTI1B-204ENST00000554659 SNRNP200O75643 2136 aaKnown RBP11.88□□□□□ -0.51
VTI1B-204ENST00000554659 C17orf51A8MQB3 221 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 ARF6P62330 175 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 NPCDR1Q9BY65 106 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 PMCHL2Q9BQD1 86 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 A0A1W2PR77 199 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 GDF9O60383 454 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 DNAL4O96015 105 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 EGR1P18146 543 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 CCDC88CQ9P219 2028 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 TRAV8-6A0A0B4J262 113 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 MFAP4P55083 255 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 SBF2Q86WG5 1849 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 CEP290O15078 2479 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 A0A1W2PQM1 296 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 SYNGR3O43761 229 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 OR11H1Q8NG94 326 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 DDB2Q92466 427 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 C14orf144Q96I85 54 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 NEUROG3Q9Y4Z2 214 aa11.87□□□□□ -0.51
VTI1B-204ENST00000554659 SVILO95425 2214 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 PPP1R17O96001 155 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
VTI1B-204ENST00000554659 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 OR9G1Q8NH87 305 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 A0A1W2PS18 150 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 STARD6P59095 220 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 LOXL4Q96JB6 756 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 NRN1LQ496H8 165 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 ZNF418Q8TF45 676 aaPredicted RBP11.86□□□□□ -0.51
VTI1B-204ENST00000554659 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
VTI1B-204ENST00000554659 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
VTI1B-204ENST00000554659 PF4V1P10720 104 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 CTSSP25774 331 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 CDCP2Q5VXM1 449 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 GPR82Q96P67 336 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 FBLN5Q9UBX5 448 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 CHCHD2Q9Y6H1 151 aaPredicted RBP11.85□□□□□ -0.51
VTI1B-204ENST00000554659 UNC13CQ8NB66 2214 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms