RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PYURFQ96I23 114 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 PEBP4Q96S96 227 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 SERPINI1Q99574 410 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 CGREF1Q99674 301 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 CHST6Q9GZX3 395 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF230Q9UIE0 474 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF835Q9Y2P0 537 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 TET2Q6N021 2002 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-211ENST00000554437 TONSLQ96HA7 1378 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 THSD7AQ9UPZ6 1657 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 IGKV1-12A0A0C4DH73 117 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 ARL5CA6NH57 179 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 A8MUN3 132 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 BET1O15155 118 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 IGKV1D-12P01611 117 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 OR5AC1P0C628 307 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 TGFBR1P36897 503 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 OPRK1P41145 380 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF140P52738 457 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-211ENST00000554437 DEFA3P59666 94 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 BSPH1Q075Z2 132 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 SP6Q3SY56 376 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 FAM104BQ5XKR9 115 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 Q6ZS49 121 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 WDR86Q86TI4 376 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 SGPP2Q8IWX5 399 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 OR9A2Q8NGT5 310 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 SGMS2Q8NHU3 365 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF675Q8TD23 568 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 ACOT12Q8WYK0 555 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 RBMXL1Q96E39 390 aaKnown RBP2.85□□□□□ -1.95
SCFD1-211ENST00000554437 MALSU1Q96EH3 234 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 LYSMD1Q96S90 227 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 SPIN2AQ99865 258 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 SPIN2BQ9BPZ2 258 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 CCDC32Q9BV29 185 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 PLA2G12AQ9BZM1 189 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 FBXL12Q9NXK8 326 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 HECW2Q9P2P5 1572 aa2.85□□□□□ -1.95
SCFD1-211ENST00000554437 TRBV20OR9-2A0A075B6H5 130 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 IGHV3-21A0A0B4J1V1 117 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 A0A0J9YY10 115 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 A0A1B0GX78 115 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 LEUTXA8MZ59 168 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 NRASP01111 189 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 HRASP01112 189 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 KRASP01116 189 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 APOA2P02652 100 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 TFPTP0C1Z6 253 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 CISD3P0C7P0 127 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF286BP0CG31 522 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 SMIM17P0DL12 118 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 PTHLHP12272 177 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 G6PCP35575 357 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 PSMD8P48556 350 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 EMP1P54849 157 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 FGF12P61328 243 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 AP1S1P61966 158 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 LY6EQ16553 131 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 SCGB2B2Q4G0G5 96 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 TNFAIP8L3Q5GJ75 292 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 SCXQ7RTU7 201 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 AMN1Q8IY45 258 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 C12orf45Q8N5I9 185 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF615Q8N8J6 731 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 SLC25A40Q8TBP6 338 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 MRPL30Q8TCC3 161 aaKnown RBP2.84□□□□□ -1.95
SCFD1-211ENST00000554437 MBD3L1Q8WWY6 194 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 ERMAPQ96PL5 475 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-211ENST00000554437 B9D2Q9BPU9 175 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 C1orf50Q9BV19 199 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 C20orf27Q9GZN8 174 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 WDR61Q9GZS3 305 aaKnown RBP2.84□□□□□ -1.95
SCFD1-211ENST00000554437 PBOV1Q9GZY1 135 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 FAM60AQ9NP50 221 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF355PQ9NSJ1 428 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 SPANXCQ9NY87 97 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 RASL12Q9NYN1 266 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 MED11Q9P086 117 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 JPT1Q9UK76 154 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 DYSFO75923 2080 aa2.84□□□□□ -1.95
SCFD1-211ENST00000554437 IGSF9BQ9UPX0 1349 aa2.84□□□□□ -1.96
SCFD1-211ENST00000554437 MIA3Q5JRA6 1907 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 TRBV19A0A075B6N1 114 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 RIIAD1A6NNX1 92 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 CLDN25C9JDP6 229 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 PDYNP01213 254 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 IFNA7P01567 189 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 IGHV1-46P01743 117 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF705DP0CH99 300 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-211ENST00000554437 INAFM2P0DMQ5 153 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 SMIM10L2AP0DMW4 78 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 SMIM10L2BP0DMW5 78 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ATP6V0CP27449 155 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ATP5G3P48201 142 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 AKR1C2P52895 323 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 TAS2R45P59539 299 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms