RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 RSRP1Q9BUV0 290 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 SLC5A7Q9GZV3 580 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 CCL28Q9NRJ3 127 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 DYNC1H1Q14204 4646 aaKnown RBP12.98□□□□□ -0.33
NEK9-204ENST00000554258 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 CD1BP29016 333 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 FXYD4P59646 89 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 EBI3Q14213 229 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 SURF2Q15527 256 aaPredicted RBP12.98□□□□□ -0.33
NEK9-204ENST00000554258 ASPHD1Q5U4P2 390 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 LPCAT3Q6P1A2 487 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 C5orf56Q8N8D9 126 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 OR5AN1Q8NGI8 311 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 SECTM1Q8WVN6 248 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 DCUN1D4Q92564 292 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 BORCS5Q969J3 196 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 TSC22D3Q99576 134 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
NEK9-204ENST00000554258 SCP2D1Q9UJQ7 156 aa12.98□□□□□ -0.33
NEK9-204ENST00000554258 IGHG2P01859 326 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 ELANEP08246 267 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
NEK9-204ENST00000554258 BTCP35070 178 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 REG1BP48304 166 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 INPP1P49441 399 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 ZNF818PQ6ZRF7 136 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 RNF152Q8N8N0 203 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 GON7Q9BXV9 100 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 TBC1D24Q9ULP9 559 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 GPR132Q9UNW8 380 aa12.97□□□□□ -0.33
NEK9-204ENST00000554258 CXorf65A6NEN9 183 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 M0R1X1 148 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 LINC00205P59089 165 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 ASAH1Q13510 395 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 ZNF66Q6ZN08 573 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 IDO2Q6ZQW0 420 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 SLC38A6Q8IZM9 456 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 ZNF383Q8NA42 475 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 ZNF486Q96H40 463 aaPredicted RBP12.96□□□□□ -0.33
NEK9-204ENST00000554258 ADTRPQ96IZ2 230 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 HSD17B10Q99714 261 aaKnown RBP12.96□□□□□ -0.33
NEK9-204ENST00000554258 MCUBQ9NWR8 336 aa12.96□□□□□ -0.33
NEK9-204ENST00000554258 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 CENPXA8MT69 81 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 H0YJW9 148 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 AP4M1O00189 453 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 GPR31O00270 319 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 LYRM1O43325 122 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 MC5RP33032 325 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 RND3P61587 244 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 RPL30P62888 115 aaKnown RBP12.95□□□□□ -0.34
NEK9-204ENST00000554258 TAGLNQ01995 201 aaKnown RBP12.95□□□□□ -0.34
NEK9-204ENST00000554258 MOB3BQ86TA1 216 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 ZFAND1Q8TCF1 268 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
NEK9-204ENST00000554258 SLC25A21Q9BQT8 299 aaPredicted RBP12.95□□□□□ -0.34
NEK9-204ENST00000554258 LINC00854A0A1B0GVQ3 168 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 LINC00473A8K010 186 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 PGLYRP1O75594 196 aaPredicted RBP12.94□□□□□ -0.34
NEK9-204ENST00000554258 CTSDP07339 412 aaPredicted RBP12.94□□□□□ -0.34
NEK9-204ENST00000554258 BRWD1-AS2P59051 145 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 Q8N6K4 173 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
NEK9-204ENST00000554258 SCGB3A2Q96PL1 93 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 RTBDNQ9BSG5 229 aaPredicted RBP12.94□□□□□ -0.34
NEK9-204ENST00000554258 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 TUBA4BQ9H853 241 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 DNAH6Q9C0G6 4158 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 DNAH11Q96DT5 4516 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 FAT2Q9NYQ8 4349 aa12.94□□□□□ -0.34
NEK9-204ENST00000554258 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
NEK9-204ENST00000554258 FGF16O43320 207 aa12.93□□□□□ -0.34
NEK9-204ENST00000554258 GLDNQ6ZMI3 551 aaPredicted RBP12.93□□□□□ -0.34
NEK9-204ENST00000554258 CMTM1Q8IZ96 169 aa12.93□□□□□ -0.34
NEK9-204ENST00000554258 EAF1Q96JC9 268 aaPredicted RBP12.93□□□□□ -0.34
NEK9-204ENST00000554258 C5orf66Q9H5L9 145 aa12.93□□□□□ -0.34
NEK9-204ENST00000554258 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
NEK9-204ENST00000554258 IGHV3-72A0A0B4J1Y9 119 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 NDUFB6O95139 128 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 BRI3O95415 125 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 PGAM2P15259 253 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 TMEM11P17152 192 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 CCR6P51684 374 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 HES1Q14469 280 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 RNF5Q99942 180 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 SLC2A9Q9NRM0 540 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
NEK9-204ENST00000554258 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
NEK9-204ENST00000554258 MPPED1O15442 326 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEK9-204ENST00000554258 MOSP00540 346 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 IGKV1D-33P01593 117 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 IGKV1-33P01594 117 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 RRASP10301 218 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 RBMS2Q15434 407 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms