RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MOB3AQ96BX8 217 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TMEM68Q96MH6 324 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 GPR61Q9BZJ8 451 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF355PQ9NSJ1 428 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ANAPC10Q9UM13 185 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 FOXA2Q9Y261 457 aaPredicted RBP6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ANK2Q01484 3957 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TET2Q6N021 2002 aaPredicted RBP6.54□□□□□ -1.36
PSEN1-209ENST00000553855 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 DPPA5A6NC42 116 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 FABP12A6NFH5 140 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 LINC00473A8K010 186 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 DISC1C4P0D8 188 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 GABARAPH6UMI1 98 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 GPR31O00270 319 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 CTDSP2O14595 271 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 PGAM2P15259 253 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 MYCNOSP40205 109 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 TAS2R19P59542 299 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 SSBP1Q04837 148 aaKnown RBP6.54□□□□□ -1.36
PSEN1-209ENST00000553855 AKIRIN2Q53H80 203 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 LAX1Q8IWV1 398 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 SPAG16Q8N0X2 631 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 OR5M8Q8NGP6 311 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 OR51H1Q8NH63 302 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 OR52I2Q8NH67 350 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 DDB2Q92466 427 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 DPF1Q92782 380 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
PSEN1-209ENST00000553855 NDUFA13Q9P0J0 144 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 CEPT1Q9Y6K0 416 aa6.54□□□□□ -1.36
PSEN1-209ENST00000553855 G3V318 75 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF701M0R085 212 aaPredicted RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 FCN1O00602 326 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 RBFOX2O43251 390 aaKnown RBP eCLIP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 OR2A4O95047 310 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 RAB3DO95716 219 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 HPRT1P00492 218 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 NQO2P16083 231 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 CDX1P47902 265 aaPredicted RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 RAB25P57735 213 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 RPL30P62888 115 aaKnown RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 MEF2DQ14814 521 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 PRSS8Q16651 343 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SCGB2B2Q4G0G5 96 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 TCTEX1D4Q5JR98 221 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 VAX1Q5SQQ9 334 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 HIST2H2BDQ6DRA6 164 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SLC25A42Q86VD7 318 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 ARRDC1Q8N5I2 433 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 TMEM229BQ8NBD8 167 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 LFNGQ8NES3 379 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 DMBX1Q8NFW5 382 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 C5orf30Q96GV9 206 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 OR2A7Q96R45 310 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SPIN2AQ99865 258 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SPIN2BQ9BPZ2 258 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 FAM103A1Q9BTL3 118 aaKnown RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 MCRIP2Q9BUT9 160 aaKnown RBP6.53□□□□□ -1.36
PSEN1-209ENST00000553855 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 HRASLSQ9HDD0 168 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 KLK11Q9UBX7 282 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 VSIG4Q9Y279 399 aa6.53□□□□□ -1.36
PSEN1-209ENST00000553855 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 C13orf42A0A1B0GVH6 325 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 H3BUA1 57 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 M0QYG6 137 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 CTDSPLO15194 276 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 PGLYRP1O75594 196 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 ATG12O94817 140 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 DHFRP00374 187 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 IGLV2-23P01705 113 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 CD3DP04234 171 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 RLN1P04808 185 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 PSMB8P28062 276 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 PPIFP30405 207 aaKnown RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 GNRHRP30968 328 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 MAS1LP35410 378 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 INPP1P49441 399 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 RAB9AP51151 201 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 CRIP2P52943 208 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 TPPP2P59282 170 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 TAS2R31P59538 309 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 RAB32Q13637 225 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 IDO2Q6ZQW0 420 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 SSX9Q7RTT3 188 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 MINDY2Q8NBR6 621 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 ZFAND1Q8TCF1 268 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms