RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 KCNG3Q8TAE7 436 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 PLPPR1Q8TBJ4 325 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 SPSB1Q96BD6 273 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 MRPS24Q96EL2 167 aaKnown RBP4.11□□□□□ -1.75
ATXN3-223ENST00000553686 TSNAXQ99598 290 aaKnown RBP4.11□□□□□ -1.75
ATXN3-223ENST00000553686 OR52A1Q9UKL2 312 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 IKZF2Q9UKS7 526 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 SNX5Q9Y5X3 404 aa4.11□□□□□ -1.75
ATXN3-223ENST00000553686 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 TMEM213A2RRL7 107 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 OR5H14A6NHG9 310 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 A8MWP6 167 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 H7C2Y5 167 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 RGS16O15492 202 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-223ENST00000553686 SULT1B1O43704 296 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 C8orf88P0DMB2 117 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 ATF1P18846 271 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 CCL1P22362 96 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 GALP22466 123 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 DEFA5Q01523 94 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 PSG5Q15238 335 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 TMEM179BQ7Z7N9 219 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 STX19Q8N4C7 294 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 NECAP1Q8NC96 275 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 CNN2Q99439 309 aaKnown RBP4.1□□□□□ -1.75
ATXN3-223ENST00000553686 YTHDF1Q9BYJ9 559 aaKnown RBP4.1□□□□□ -1.75
ATXN3-223ENST00000553686 MED20Q9H944 212 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 OR2S2Q9NQN1 319 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 GID8Q9NWU2 228 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 ZNF230Q9UIE0 474 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-223ENST00000553686 UFC1Q9Y3C8 167 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 R4GMQ9 66 aa4.1□□□□□ -1.75
ATXN3-223ENST00000553686 DIRAS1O95057 198 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 HLA-AP01891 365 aaKnown RBP4.09□□□□□ -1.75
ATXN3-223ENST00000553686 OR9G9P0C7N8 305 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 VPREB1P12018 145 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 FUT3P21217 361 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 RRM2P31350 389 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 HCCSP53701 268 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 LIPEQ05469 1076 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 MORN2Q502X0 79 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 IGSF11Q5DX21 431 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 SLC35D3Q5M8T2 416 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 C6orf183Q5T699 404 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 FAM71F2Q6NXP2 309 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 ZNF833PQ6ZTB9 187 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 UTS2BQ765I0 119 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 APRG1Q8IVJ8 170 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 OR8D4Q8NGM9 314 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 CCDC107Q8WV48 283 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 FAM162AQ96A26 154 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 C7orf34Q96L11 122 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 PHB2Q99623 299 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 VGLL1Q99990 258 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 EBF4Q9BQW3 602 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 BTBD10Q9BSF8 475 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 TMEM109Q9BVC6 243 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 TAS2R1Q9NYW7 299 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 TRAPPC2LQ9UL33 140 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 WASHC3Q9Y3C0 194 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 V9GYQ6 96 aa4.09□□□□□ -1.75
ATXN3-223ENST00000553686 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 TRBV9A0A0B4J1U6 114 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 IGKV1-9A0A0C4DH69 117 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 A0A1B0GW64 132 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 PPP5D1E7EU14 171 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 AIPO00170 330 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 HBZP02008 142 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 MT-ND4P03905 459 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 MAGEA2P43356 314 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 VSNL1P62760 191 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 ODF4Q2M2E3 257 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 COQ5Q5HYK3 327 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 ELP2Q6IA86 826 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 MORN3Q6PF18 240 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-223ENST00000553686 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 SUMF2Q8NBJ7 301 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 BBS1Q8NFJ9 593 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 RFT1Q96AA3 541 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 OPALINQ96PE5 141 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 ADGRL4Q9HBW9 690 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 PIPOXQ9P0Z9 390 aa4.08□□□□□ -1.76
ATXN3-223ENST00000553686 ERICH4A6NGS2 130 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 BBIP1A8MTZ0 92 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 ZNF705EA8MWA4 302 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-223ENST00000553686 H0YJW9 148 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 FXYD1O00168 92 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 MRASO14807 208 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 RAB29O14966 203 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 SRSF10O75494 262 aaKnown RBP4.07□□□□□ -1.76
ATXN3-223ENST00000553686 GMNNO75496 209 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 S1PR2O95136 353 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 SOX14O95416 240 aa4.07□□□□□ -1.76
ATXN3-223ENST00000553686 MT-ND2P03891 347 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms