RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ULBP3Q9BZM4 244 aa3.4□□□□□ -1.87
RDH11-204ENST00000553578 OR2D2Q9H210 308 aa3.4□□□□□ -1.87
RDH11-204ENST00000553578 PNRC2Q9NPJ4 139 aaKnown RBP3.4□□□□□ -1.87
RDH11-204ENST00000553578 CYTL1Q9NRR1 136 aa3.4□□□□□ -1.87
RDH11-204ENST00000553578 NECAP2Q9NVZ3 263 aa3.4□□□□□ -1.87
RDH11-204ENST00000553578 MRPL27Q9P0M9 148 aaKnown RBP3.4□□□□□ -1.87
RDH11-204ENST00000553578 OR2W1Q9Y3N9 320 aa3.4□□□□□ -1.87
RDH11-204ENST00000553578 TNRC6AQ8NDV7 1962 aaKnown RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GRIFINA4D1Z8 144 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 TMEM8BA6NDV4 472 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ANTXRLA6NF34 631 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 P2RX6O15547 441 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ARL6IP5O75915 188 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 JTBO76095 146 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GCSHP23434 173 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LIM2P55344 173 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ZNF676Q8N7Q3 588 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ZDHHC22Q8N966 263 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LRRC75AQ8NAA5 344 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 OR51A4Q8NGJ6 313 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 OR9G4Q8NGQ1 327 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 RTN4IP1Q8WWV3 396 aaPredicted RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 SCGB3A2Q96PL1 93 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 MCRIP2Q9BUT9 160 aaKnown RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 HES4Q9HCC6 221 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 IGLV3-32A0A0A0MS00 114 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 A0A0J9YY10 115 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 A0A1W2PQD3 144 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE12JA6NER3 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 CPSF4LA6NMK7 179 aaKnown RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 H3BUT2 72 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 SDCBPO00560 298 aaPredicted RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE7O76087 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 HRASP01112 189 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 KRASP01116 189 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE12FP0CL80 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE12GP0CL81 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE12IP0CL82 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LIMS3P0CW19 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LIMS4P0CW20 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LMO1P25800 156 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 CFHR3Q02985 330 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LTBQ06643 244 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE4Q13068 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 OR1Q1Q15612 314 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 LRRC75BQ2VPJ9 315 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GAGE13Q4V321 117 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 PMS2CLQ68D20 193 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 WDR31Q8NA23 367 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 OR2K2Q8NGT1 345 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GPR82Q96P67 336 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 DERL3Q96Q80 235 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 MANBALQ9NQG1 85 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 CYSLTR1Q9Y271 337 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 INSIG2Q9Y5U4 225 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 MAP1BP46821 2468 aaKnown RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 FAM231BA6NCW3 169 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 J3QLW9 94 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 NTN1O95631 604 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 EML2O95834 649 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 CD3DP04234 171 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 CDK2P24941 298 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 OPRM1P35372 400 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ZNF136P52737 540 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 SLC25A1P53007 311 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 NXPH1P58417 271 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ADORA2A-AS1P86434 159 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 HOXA4Q00056 320 aaPredicted RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 PNRC1Q12796 327 aaPredicted RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 SLC25A53Q5H9E4 307 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 STUMQ69YW2 141 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 GLIPR1L1Q6UWM5 242 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 ADGRE4PQ86SQ3 457 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 TMEM255BQ8WV15 326 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 NEU4Q8WWR8 484 aaPredicted RBP3.39□□□□□ -1.87
RDH11-204ENST00000553578 BORCS7Q96B45 105 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 SIGLEC12Q96PQ1 595 aa3.39□□□□□ -1.87
RDH11-204ENST00000553578 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 A0A1B0GTI1 187 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 KBTBD11-OT1A0A1B0GTJ5 212 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 TMEM189A5PLL7 270 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 IFITM5A6NNB3 132 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
RDH11-204ENST00000553578 H0YIZ8 118 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 H7C1C5 153 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 MPPED1O15442 326 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 NDUFS7O75251 213 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 FCGR2CP31995 323 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 TAS2R20P59543 309 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 CATR1Q13166 79 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 CA13Q8N1Q1 262 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF439Q8NDP4 499 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR10P1Q8NGE3 313 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR2G3Q8NGZ4 309 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNRF4Q8WWF5 429 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 NRGNQ92686 78 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 NRTNQ99748 197 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms