RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 SAA1P0DJI8 122 aaPredicted RBP11.05□□□□□ -0.64
APEX1-205ENST00000553555 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
APEX1-205ENST00000553555 LGALSLQ3ZCW2 172 aaPredicted RBP11.05□□□□□ -0.64
APEX1-205ENST00000553555 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 OR4A16Q8NH70 328 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 RNF5Q99942 180 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 MAGT1Q9H0U3 335 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 BET1LQ9NYM9 111 aa11.05□□□□□ -0.64
APEX1-205ENST00000553555 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
APEX1-205ENST00000553555 NOTCH2Q04721 2471 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 SVEP1Q4LDE5 3571 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 UPK2O00526 184 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 NXPH3O95157 252 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 AARDQ4LEZ3 155 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 BRD3OSQ6XYD6 125 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
APEX1-205ENST00000553555 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
APEX1-205ENST00000553555 SMAD7O15105 426 aaKnown RBP11.03□□□□□ -0.64
APEX1-205ENST00000553555 ARPC5O15511 151 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 RBMXL2O75526 392 aaKnown RBP11.03□□□□□ -0.64
APEX1-205ENST00000553555 SNAPC5O75971 98 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 UBE2KP61086 200 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 EBI3Q14213 229 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 TMEM167AQ8TBQ9 72 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 DCUN1D4Q92564 292 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
APEX1-205ENST00000553555 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
APEX1-205ENST00000553555 C11orf1Q9H5F2 150 aa11.03□□□□□ -0.64
APEX1-205ENST00000553555 C15orf61A6NNL5 157 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 E5RGE8 158 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 L7N2F9 121 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 CHST1O43916 411 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 KBTBD11O94819 623 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 MOSP00540 346 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 IGKV1D-33P01593 117 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 IGKV1-33P01594 117 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 CRYGBP07316 175 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.64
APEX1-205ENST00000553555 CXCL2P19875 107 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 CD24P25063 80 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 CNTFRP26992 372 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 AP2S1P53680 142 aaPredicted RBP11.02□□□□□ -0.64
APEX1-205ENST00000553555 OR2B8PP59922 312 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 TNFRSF9Q07011 255 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 PSG5Q15238 335 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 ZNF429Q86V71 674 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 TEX45Q8NA69 505 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 OR2T10Q8NGZ9 312 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 OR4A5Q8NH83 315 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 VSTM2AQ8TAG5 236 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 EAF1Q96JC9 268 aaPredicted RBP11.02□□□□□ -0.64
APEX1-205ENST00000553555 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.64
APEX1-205ENST00000553555 WRBO00258 174 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 SYNGR2O43760 224 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 SLC25A17O43808 307 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 MED6O75586 246 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 BRS3P32247 399 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 BPIFB3P59826 476 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 THNSL2Q86YJ6 484 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 OR52E5Q8NH55 327 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 RBKSQ9H477 322 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 TMEM14BQ9NUH8 114 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
APEX1-205ENST00000553555 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
APEX1-205ENST00000553555 TLN2Q9Y4G6 2542 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 CELSR1Q9NYQ6 3014 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 ACANP16112 2415 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 A0A0U1RQK1 487 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 KCNAB3O43448 404 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 SSSCA1O60232 199 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 FSHBP01225 129 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 PVALBP20472 110 aaPredicted RBP11.01□□□□□ -0.65
APEX1-205ENST00000553555 P2RY1P47900 373 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 PAX9P55771 341 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 SPCS3P61009 180 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 HES1Q14469 280 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 HNF4GQ14541 408 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 PDLIM3Q53GG5 364 aaPredicted RBP11.01□□□□□ -0.65
APEX1-205ENST00000553555 FBLN7Q53RD9 439 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 FAM120AOSQ5T036 256 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
APEX1-205ENST00000553555 RAB40CQ96S21 281 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 CACFD1Q9UGQ2 172 aa11.01□□□□□ -0.65
APEX1-205ENST00000553555 RNF222A6NCQ9 220 aa11□□□□□ -0.65
APEX1-205ENST00000553555 SPDEFO95238 335 aa11□□□□□ -0.65
APEX1-205ENST00000553555 TMEM50AO95807 157 aa11□□□□□ -0.65
APEX1-205ENST00000553555 IFNA17P01571 189 aa11□□□□□ -0.65
APEX1-205ENST00000553555 FAM106CPP0CH98 169 aa11□□□□□ -0.65
APEX1-205ENST00000553555 NUP62P37198 522 aaPredicted RBP11□□□□□ -0.65
APEX1-205ENST00000553555 F2RL1P55085 397 aa11□□□□□ -0.65
APEX1-205ENST00000553555 HSPE1P61604 102 aaKnown RBP11□□□□□ -0.65
APEX1-205ENST00000553555 VAMP2P63027 116 aa11□□□□□ -0.65
APEX1-205ENST00000553555 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
APEX1-205ENST00000553555 Q8N6K4 173 aa11□□□□□ -0.65
APEX1-205ENST00000553555 NPBQ8NG41 125 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms