RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 CFL1P23528 166 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 PSMA1P25786 263 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 PSMB9P28065 219 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 CRABP1P29762 137 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OPRM1P35372 400 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 CBX5P45973 191 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 INPP1P49441 399 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ETV1P50549 477 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ATP5J2P56134 94 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 UBE2KP61086 200 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TSPAN5P62079 268 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 MRPS15P82914 257 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GLO1Q04760 184 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 PMS2P3Q13401 168 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GPR176Q14439 515 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TRAM1Q15629 374 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 MAPK14Q16539 360 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 NDUFA5Q16718 116 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 DEFB109BQ30KR1 87 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 Q3ZCU0 254 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 LGALSLQ3ZCW2 172 aaPredicted RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 PYDC2Q56P42 97 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 RBM48Q5RL73 367 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 FAM104BQ5XKR9 115 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 C3orf33Q6P1S2 294 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 FAHD1Q6P587 224 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TNFAIP8L2Q6P589 184 aaPredicted RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 SRCAPQ6ZRS2 3230 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TMPPEQ6ZT21 453 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GRINAQ7Z429 371 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TMEM144Q7Z5S9 345 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 PLCZ1Q86YW0 608 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GID4Q8IVV7 300 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 C8orf59Q8N0T1 100 aaPredicted RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 TEX29Q8N6K0 151 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR52R1Q8NGF1 315 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR5L1Q8NGL2 311 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR2T4Q8NH00 348 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR10A6Q8NH74 314 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR5K1Q8NHB7 308 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 CCL4L1Q8NHW4 92 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 CMTM2Q8TAZ6 248 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 LGALS14Q8TCE9 139 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ITLN2Q8WWU7 325 aaPredicted RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ASB17Q8WXJ9 295 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 AP3S1Q92572 193 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GTF2H4Q92759 462 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 SPTSSAQ969W0 71 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR2V2Q96R30 315 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR7D2Q96RA2 312 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR52B2Q96RD2 323 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF649Q9BS31 505 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 EBPLQ9BY08 206 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 POTEKPQ9BYX7 375 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 NXF2Q9GZY0 626 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 SLC25A31Q9H0C2 315 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ABCG5Q9H222 651 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 OR51I1Q9H343 314 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 DUSP21Q9H596 190 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 VSIRQ9H7M9 311 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 RHOFQ9HBH0 211 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 SND1-IT1Q9HBX3 110 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 BCL2L10Q9HD36 194 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ASF1BQ9NVP2 202 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 FAIMQ9NVQ4 179 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ARMC1Q9NVT9 282 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 USE1Q9NZ43 259 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GLS2Q9UI32 602 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF391Q9UJN7 358 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 C14orf166Q9Y224 244 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 POMPQ9Y244 141 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ERGIC3Q9Y282 383 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 POFUT2Q9Y2G5 429 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 POLR1DQ9Y2S0 133 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 HDGFL3Q9Y3E1 203 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF337Q9Y3M9 751 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 SAMHD1Q9Y3Z3 626 aaKnown RBP1.19□□□□□ -2.22
LIMA1-209ENST00000552008 ASB4Q9Y574 426 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 HSPE1-MOB4S4R3N1 261 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 MYH7BA7E2Y1 1941 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 MYH6P13533 1939 aa1.19□□□□□ -2.22
LIMA1-209ENST00000552008 GOLGB1Q14789 3259 aaKnown RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CDK5RAP2Q96SN8 1893 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 COL11A1P12107 1806 aaPredicted RBP1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TRAV36DV7A0A075B6V5 113 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 IGHV1-45A0A0A0MS14 117 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 TRGV5A0A0B4J1U4 118 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PNMA8CA0A1B0GUJ8 204 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 A0A1B0GW15 77 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ARRDC5A6NEK1 342 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CCDC160A6NGH7 325 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF860A6NHJ4 632 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ARGFXA6NJG6 315 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF879B4DU55 563 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 IGLL5B9A064 214 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ZNF670-ZNF695F2Z2N8 137 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 UPK1AO00322 258 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 PDCD5O14737 125 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 CHP2O43745 196 aa1.18□□□□□ -2.22
LIMA1-209ENST00000552008 ARL6IP5O75915 188 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms