RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 FOXA2Q9Y261 457 aaPredicted RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ANKRD34BA5PLL1 514 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 SLC31A2O15432 143 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 SPRY2O43597 315 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 ORC5O43913 435 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 RBBP9O75884 186 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 GZMHP20718 246 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 BMI1P35226 326 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 RCVRNP35243 200 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 HLA-DRB3P79483 266 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 TMEM30BQ3MIR4 351 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 RNASE12Q5GAN4 147 aaKnown RBP7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 Q6ZS49 121 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 HOGA1Q86XE5 327 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 OR52I2Q8NH67 350 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 MRGPRDQ8TDS7 321 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 CCDC107Q8WV48 283 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 CYYR1Q96J86 154 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 SRRQ9GZT4 340 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 Q9N2K0 584 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 SLC2A8Q9NY64 477 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 SELENOKQ9Y6D0 94 aa7.57□□□□□ -1.2
SLC48A1-209ENST00000552003 MEIS3P1A6NDR6 274 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 TRDCB7Z8K6 153 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 ARPC1BO15143 372 aaKnown RBP7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 SPINT2O43291 252 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 GSTT2BP0CG30 244 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 CTRB1P17538 263 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 RCC1P18754 421 aaPredicted RBP7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 CD40LGP29965 261 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 TPPP2P59282 170 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 TAS2R46P59540 309 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 MMDQ15546 238 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 HMGN3Q15651 99 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 DEFB135Q30KP9 77 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 ACTBL2Q562R1 376 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 TRIQKQ629K1 86 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 CTRB2Q6GPI1 263 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 BEST4Q8NFU0 473 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 CCDC32Q9BV29 185 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 RANGRFQ9HD47 186 aaPredicted RBP7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 TAS2R8Q9NYW2 309 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 MTFP1Q9UDX5 166 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 ANXA10Q9UJ72 324 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 ANAPC10Q9UM13 185 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 GAB2Q9UQC2 676 aa7.56□□□□□ -1.2
SLC48A1-209ENST00000552003 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 FCN1O00602 326 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 FABP7O15540 132 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 DIRAS3O95661 229 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 NAT1P18440 290 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 TBPP20226 339 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 ZP3P21754 424 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 INPP1P49441 399 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 PPP5CP53041 499 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 AP3S2P59780 193 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 ARPC4P59998 168 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 DEFA5Q01523 94 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 C5orf64Q2M2E5 130 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 STEAP3Q658P3 488 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 PRR18Q8N4B5 295 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 LINC00311Q8N616 119 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 OR10A7Q8NGE5 316 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 OR4A4PQ8NGN8 299 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 UBALD1Q8TB05 177 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 MAFIPQ8WZ33 124 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 ARL11Q969Q4 196 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 GALMQ96C23 342 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 FAM103A1Q9BTL3 118 aaKnown RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 TAF9BQ9HBM6 251 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF230Q9UIE0 474 aaPredicted RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 TP53TG1Q9Y2A0 90 aa7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 RBMX2Q9Y388 322 aaKnown RBP7.55□□□□□ -1.2
SLC48A1-209ENST00000552003 C16orf90A8MZG2 172 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 C15orf65H3BRN8 121 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 HBZP02008 142 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 CTXN2P0C2S0 81 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF134P52741 427 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 TAS2R19P59542 299 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 CX3CL1P78423 397 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 CDK10Q15131 360 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 DEFB114Q30KQ6 69 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 Q6ZWC4 215 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 TOMM5Q8N4H5 51 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 OR5AP2Q8NGF4 316 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 OR2K2Q8NGT1 345 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 OR5H2Q8NGV7 314 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 C2CD4CQ8TF44 421 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 DEDD2Q8WXF8 326 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 SNAPC3Q92966 411 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 TRIM63Q969Q1 353 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 PARP12Q9H0J9 701 aaKnown RBP7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 ZC4H2Q9NQZ6 224 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 KLK11Q9UBX7 282 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms