RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 A0A1W2PPV4 95 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 RRHO14718 337 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 CHRNA7P36544 502 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ZNF83P51522 516 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ZNF134P52741 427 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
CACNB3-219ENST00000551544 VHLLQ6RSH7 139 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 Q8N7P7 452 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 LEAP2Q969E1 77 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ZNF71Q9NQZ8 489 aaPredicted RBP10.8□□□□□ -0.68
CACNB3-219ENST00000551544 TNFSF13O75888 250 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 HRASP01112 189 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 SNRPCP09234 159 aaKnown RBP10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ATP5G3P48201 142 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ERVK-16P61578 105 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 UTF1Q5T230 341 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 CYB5R2Q6BCY4 276 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 ABHD12Q8N2K0 398 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 SVIPQ8NHG7 77 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 TUBG2Q9NRH3 451 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 SPENQ96T58 3664 aaKnown RBP10.8□□□□□ -0.68
CACNB3-219ENST00000551544 SRRM5B3KS81 715 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
CACNB3-219ENST00000551544 MZT1Q08AG7 82 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 MOGAT3Q86VF5 341 aa10.8□□□□□ -0.68
CACNB3-219ENST00000551544 SPAARA0A1B0GVQ0 90 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 MGST3O14880 152 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 CD82P27701 267 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 P2RY6Q15077 328 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 FAM201AQ5SY85 155 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 GCSAMQ8N6F7 178 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 DEFB124Q8NES8 71 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 OR2V2Q96R30 315 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 S1PR3Q99500 378 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 DERL1Q9BUN8 251 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 DKK4Q9UBT3 224 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 JPT1Q9UK76 154 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 HCFC1P51610 2035 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 M0R1B8 84 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 SPRY3O43610 288 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 CCKARP32238 428 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 RPP30P78346 268 aaKnown RBP10.79□□□□□ -0.68
CACNB3-219ENST00000551544 DEFB109BQ30KR1 87 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 TREML4Q6UXN2 200 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 PPP1R35Q8TAP8 253 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 TMEM37Q8WXS4 190 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 TMEM18Q96B42 140 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 TMEM204Q9BSN7 226 aa10.79□□□□□ -0.68
CACNB3-219ENST00000551544 ICE1Q9Y2F5 2266 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 EP300Q09472 2414 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-219ENST00000551544 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-219ENST00000551544 NDUFB4O95168 129 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 TYMSP04818 313 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 LOXL3P58215 753 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 GNB1P62873 340 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 PDLIM3Q53GG5 364 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-219ENST00000551544 FAM90A1Q86YD7 464 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 OR2T10Q8NGZ9 312 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 MS4A5Q9H3V2 200 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 TMEM140Q9NV12 185 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 SLC25A15Q9Y619 301 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 CACNA1GO43497 2377 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 PTPRBP23467 1997 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 YPEL1O60688 119 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 C1orf229Q6ZS94 237 aaPredicted RBP10.78□□□□□ -0.68
CACNB3-219ENST00000551544 YPEL2Q96QA6 119 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 IFI27L2Q9H2X8 130 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 FUT9Q9Y231 359 aa10.78□□□□□ -0.68
CACNB3-219ENST00000551544 PGPEP1LA6NFU8 196 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 GGCTO75223 188 aaKnown RBP10.77□□□□□ -0.68
CACNB3-219ENST00000551544 CGAP01215 116 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 RELBQ01201 579 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 IQCJQ1A5X6 159 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 SSMEM1Q8WWF3 244 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 MGST2Q99735 147 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.68
CACNB3-219ENST00000551544 AHRRA9YTQ3 701 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 EREGO14944 169 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 GFRA3O60609 400 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 VENTXO95231 258 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 ARL14EPLP0DKL9 152 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 VDAC2P45880 294 aaPredicted RBP10.77□□□□□ -0.69
CACNB3-219ENST00000551544 PAX5Q02548 391 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 FAM78BQ5VT40 261 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 IGFL2Q6UWQ7 119 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
CACNB3-219ENST00000551544 CALYQ9NYX4 217 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 CACNA1HO95180 2353 aa10.77□□□□□ -0.69
CACNB3-219ENST00000551544 PDE6DO43924 150 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 SOX15O60248 233 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 FTH1P19P0C7X4 201 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 SRP14P37108 136 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms