RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 RALYQ9UKM9 306 aaKnown RBP9.37□□□□□ -0.91
RAB5C-208ENST00000551338 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
RAB5C-208ENST00000551338 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 RRHO14718 337 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 LY6HO94772 140 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 IGKV1D-33P01593 117 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 IGKV1-33P01594 117 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 SAA1P0DJI8 122 aaPredicted RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 REG1BP48304 166 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 RAB2AP61019 212 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 DLK1P80370 383 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 TAGLNQ01995 201 aaKnown RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 TLE4Q04727 773 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM177Q53S58 311 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 Q8N7P7 452 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 C8orf46Q8TAG6 207 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM186Q96B77 213 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 RCC1LQ96I51 464 aaKnown RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 EIF5A2Q9GZV4 153 aaKnown RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 HEYLQ9NQ87 328 aaPredicted RBP9.36□□□□□ -0.91
RAB5C-208ENST00000551338 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 WDR83OSQ9Y284 106 aa9.36□□□□□ -0.91
RAB5C-208ENST00000551338 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 KBTBD11O94819 623 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 SNAPINO95295 136 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 IFNA10P01566 189 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 PLA2G5P39877 138 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 RPP30P78346 268 aaKnown RBP9.35□□□□□ -0.91
RAB5C-208ENST00000551338 ICAM4Q14773 271 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF506Q5JVG8 444 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 WDR25Q64LD2 544 aaPredicted RBP9.35□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF787Q6DD87 383 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 ETV3LQ6ZN32 361 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 OR8B3Q8NGG8 313 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 CLDND2Q8NHS1 167 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
RAB5C-208ENST00000551338 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 NEU4Q8WWR8 484 aaPredicted RBP9.35□□□□□ -0.91
RAB5C-208ENST00000551338 HARBI1Q96MB7 349 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 OR8B2Q96RD0 313 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 RARRES2Q99969 163 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 MIOXQ9UGB7 285 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 CFAP47Q6ZTR5 3102 aa9.35□□□□□ -0.91
RAB5C-208ENST00000551338 HIVEP3Q5T1R4 2406 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 PIEZO2Q9H5I5 2752 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 TNCP24821 2201 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 NUPL2O15504 423 aaKnown RBP9.34□□□□□ -0.91
RAB5C-208ENST00000551338 SRP19P09132 144 aaKnown RBP9.34□□□□□ -0.91
RAB5C-208ENST00000551338 AGAP20933 346 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 NPY1RP25929 384 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 IL3RAP26951 378 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 DLX1P56177 255 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 PRCDQ00LT1 54 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 HNF4GQ14541 408 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 HAGHQ16775 308 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 HLA-DRB5Q30154 266 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 CLRN3Q8NCR9 226 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 SLC24A4Q8NFF2 622 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 NPCDR1Q9BY65 106 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 SMDT1Q9H4I9 107 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 ARHGAP32A7KAX9 2087 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 MALRD1Q5VYJ5 2156 aa9.34□□□□□ -0.91
RAB5C-208ENST00000551338 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 IGHV2-26A0A0B4J1V2 119 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 MAP1LC3B2A6NCE7 125 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 C22orf46C9J442 243 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 H7C2Y5 167 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 IGLV2-23P01705 113 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 RBP4P02753 201 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 PPIAL4GP0DN37 164 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 RAB11AP62491 216 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 FFAR4Q5NUL3 377 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 LCN15Q6UWW0 184 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 TGIF2LXQ8IUE1 241 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 LY6G5BQ8NDX9 201 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 RAB1CQ92928 201 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 TNFRSF14Q92956 283 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 AIFM2Q9BRQ8 373 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 PCGF1Q9BSM1 259 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 GGACTQ9BVM4 153 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 MAP1LC3BQ9GZQ8 125 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
RAB5C-208ENST00000551338 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
RAB5C-208ENST00000551338 CTXND1A0A1B0GTU2 59 aa9.32□□□□□ -0.92
RAB5C-208ENST00000551338 A6NNC1 897 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms