RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 HTR2BP41595 481 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TMEM267Q0VDI3 215 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-206ENST00000550611 PNRC1Q12796 327 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-206ENST00000550611 RIPK1Q13546 671 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 LRRC36Q1X8D7 754 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TMEM30BQ3MIR4 351 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 PIGYQ3MUY2 71 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 MOGAT2Q3SYC2 334 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 AARDQ4LEZ3 155 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 MORN2Q502X0 79 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TP53I3Q53FA7 332 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 LY6G6FQ5SQ64 297 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF691Q5VV52 312 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 LGALS9CQ6DKI2 356 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 PYHIN1Q6K0P9 492 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF562Q6V9R5 426 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF833PQ6ZTB9 187 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 SMIM29Q86T20 159 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 DHFR2Q86XF0 187 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 CDH26Q8IXH8 852 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 Q8N402 240 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 DEFB125Q8N687 156 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TCEANCQ8N8B7 351 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 OR9G4Q8NGQ1 327 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 OR13C9Q8NGT0 318 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 OR2K2Q8NGT1 345 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 UBALD1Q8TB05 177 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 CANT1Q8WVQ1 401 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 DNAJC9Q8WXX5 260 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 MOB3AQ96BX8 217 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 NSL1Q96IY1 281 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 UHRF2Q96PU4 802 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TBX5Q99593 518 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 SLC29A1Q99808 456 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF251Q9BRH9 671 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 OVOL2Q9BRP0 275 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TMED9Q9BVK6 235 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 CST11Q9H112 138 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 DIABLOQ9NR28 239 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 FAM118AQ9NWS6 357 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 IL36GQ9NZH8 169 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 SPATA2Q9UM82 520 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 ERGIC3Q9Y282 383 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TMED3Q9Y3Q3 217 aa2.63□□□□□ -1.99
LIMA1-206ENST00000550611 TNCP24821 2201 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 NUPR2A6NF83 97 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 H3BUA1 57 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 GABRPO00591 440 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 GEMIN2O14893 280 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 YPEL1O60688 119 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 SC5DO75845 299 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 CNIH1O95406 144 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 FADS2O95864 444 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 HBZP02008 142 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 APOHP02749 345 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 CD7P09564 240 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RCC1P18754 421 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ALDH3A2P51648 485 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RBM11P57052 281 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 SYNJ2BPP57105 145 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ADARB1P78563 741 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RPL24P83731 157 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 TNFRSF9Q07011 255 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 FLOT2Q14254 428 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ECSCRQ19T08 205 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RGS21Q2M5E4 152 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 DEFB114Q30KQ6 69 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 CCDC58Q4VC31 144 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 PHLDA2Q53GA4 152 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ACTBL2Q562R1 376 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 C6orf183Q5T699 404 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 KDM4DQ6B0I6 523 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 LCN12Q6JVE5 192 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF343Q6P1L6 599 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 IDO2Q6ZQW0 420 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 C5orf24Q7Z6I8 188 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 LINC00596Q86U02 117 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 GTSCR1Q86UQ5 136 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 PPP1R27Q86WC6 154 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 GID4Q8IVV7 300 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 FAM219AQ8IW50 185 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 SERPINA12Q8IW75 414 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 LAX1Q8IWV1 398 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 AQP12AQ8IXF9 295 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 LFNGQ8NES3 379 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR10V1Q8NGI7 309 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR51A2Q8NGJ7 313 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR5D14Q8NGL3 314 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR13C3Q8NGS6 347 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR10K1Q8NGX5 313 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR52N1Q8NH53 320 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 OR1L1Q8NH94 360 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 CCDC107Q8WV48 283 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ASB9Q96DX5 294 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 PELI1Q96FA3 418 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 CYYR1Q96J86 154 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RDH12Q96NR8 316 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 YPEL2Q96QA6 119 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 IL4I1Q96RQ9 567 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 RNF5Q99942 180 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms