RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TRAV8-7A0A075B6U6 113 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 A0A0G2JMP0 313 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 A0A0X1KG70 313 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 EFCAB10A6NFE3 127 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 DPRXA6NFQ7 191 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 TMEM210A6NLX4 147 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 H0YJX3 145 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 J3QLI3 93 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 M0R1B8 84 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 NSA2O95478 260 aaKnown RBP2.59□□□□□ -1.99
LIMA1-205ENST00000550592 APOC1P02654 83 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 C1QAP02745 245 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 FAM228BP0C875 321 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 CCL3P10147 92 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 PEBP1P30086 187 aaKnown RBP2.59□□□□□ -1.99
LIMA1-205ENST00000550592 PSMB2P49721 201 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 RGS6P49758 472 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 CDK9P50750 372 aaKnown RBP2.59□□□□□ -1.99
LIMA1-205ENST00000550592 XIAPP98170 497 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 BSPH1Q075Z2 132 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 VAMP3Q15836 100 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 C3orf33Q6P1S2 294 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 CASP12Q6UXS9 341 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 LRRC6Q86X45 466 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 SYS1Q8N2H4 156 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 UBL4BQ8N7F7 174 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 SLC26A10Q8NG04 563 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 NT5CQ8TCD5 201 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 C22orf15Q8WYQ4 148 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 HGDQ93099 445 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 TSLPQ969D9 159 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 DCUN1D1Q96GG9 259 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 PDCD1LG2Q9BQ51 273 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 C1orf50Q9BV19 199 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 TMED9Q9BVK6 235 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 MS4A8Q9BY19 250 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 RAB22AQ9UL26 194 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 ERGIC3Q9Y282 383 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 ORC6Q9Y5N6 252 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 NCKAP5O14513 1909 aa2.59□□□□□ -1.99
LIMA1-205ENST00000550592 HEATR1Q9H583 2144 aaKnown RBP2.59□□□□□ -2
LIMA1-205ENST00000550592 ARFGEF3Q5TH69 2177 aa2.59□□□□□ -2
LIMA1-205ENST00000550592 LOC100506127A0A0U1RQW1 187 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 SMIM31A0A1B0GVY4 71 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 RAB19A4D1S5 217 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 TVP23AA6NH52 213 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 ATP6V1G2-DDX39BF2Z307 99 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 H3BQF6 201 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 PGRMC1O00264 195 aaKnown RBP2.58□□□□□ -2
LIMA1-205ENST00000550592 ZNF593O00488 134 aaPredicted RBP2.58□□□□□ -2
LIMA1-205ENST00000550592 MFNGO00587 321 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 SLC22A1O15245 554 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 MYO1DO94832 1006 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 SNAP29O95721 258 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 IGKV1-17P01599 117 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 IGKV1D-16P01601 117 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 BGNP21810 368 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 GNGT1P63211 74 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 DNAL1Q4LDG9 190 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 NT5DC3Q86UY8 548 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 C2orf73Q8N5S3 287 aaPredicted RBP2.58□□□□□ -2
LIMA1-205ENST00000550592 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.58□□□□□ -2
LIMA1-205ENST00000550592 FAM172AQ8WUF8 416 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 ORAOV1Q8WV07 137 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 RAD51AP1Q96B01 352 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 SPACA5Q96QH8 159 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 DOHHQ9BU89 302 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 VAPAQ9P0L0 249 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 PRO0628Q9UI54 55 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 RWDD2AQ9UIY3 292 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 ARL2BPQ9Y2Y0 163 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 SAMHD1Q9Y3Z3 626 aaKnown RBP2.58□□□□□ -2
LIMA1-205ENST00000550592 V9GYQ6 96 aa2.58□□□□□ -2
LIMA1-205ENST00000550592 DOCK11Q5JSL3 2073 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 FUOMA2VDF0 154 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 E7EQL1 145 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 K7EN84 100 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 UPK1AO00322 258 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 DENRO43583 198 aaKnown RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 NDUFA2O43678 99 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 OCM2P0CE71 109 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 OCMP0CE72 109 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 HLA-GP17693 338 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 IL5RAQ01344 420 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 FADDQ13158 208 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 UAP1Q16222 522 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 ZNF678Q5SXM1 525 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 SYT6Q5T7P8 510 aaPredicted RBP2.57□□□□□ -2
LIMA1-205ENST00000550592 FAM104BQ5XKR9 115 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 NIPAL1Q6NVV3 410 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 TBPL2Q6SJ96 375 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 SBSNQ6UWP8 590 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 FAM151BQ6UXP7 276 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 SSX8Q7RTT4 187 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 TMEM35BQ8NCS4 154 aa2.57□□□□□ -2
LIMA1-205ENST00000550592 OR4S1Q8NGB4 309 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms