RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DCSTAMPQ9H295 470 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 FBXL7Q9UJT9 491 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 IGKV1D-13A0A0B4J2D9 117 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 E7EUB6 86 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 IGKV1-13P0DP09 117 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 BRWD1-AS2P59051 145 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 EIF4EBP1Q13541 118 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 GUCA2BQ16661 112 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 HACD4Q5VWC8 232 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 PUSL1Q8N0Z8 303 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 VSTM2AQ8TAG5 236 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 TMEM167AQ8TBQ9 72 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 WDR89Q96FK6 387 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 FANCD2OSQ96PS1 177 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 OR2A7Q96R45 310 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 SLC2A9Q9NRM0 540 aa16.31■□□□□ 0.2
SMARCC2-210ENST00000550519 A0A1B0GW64 132 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 KBTBD11O94819 623 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 ZNF735P0CB33 412 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 GALP22466 123 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 CBLN1P23435 193 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 RPL27AP46776 148 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 KLK9Q2XQG4 91 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 CNIH2Q6PI25 160 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 OR4S2Q8NH73 311 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 CCDC140Q96MF4 163 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 HSD17B10Q99714 261 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 KLK9Q9UKQ9 250 aa16.3■□□□□ 0.2
SMARCC2-210ENST00000550519 NDUFB8O95169 186 aa16.29■□□□□ 0.2
SMARCC2-210ENST00000550519 CRYGCP07315 174 aa16.29■□□□□ 0.2
SMARCC2-210ENST00000550519 MAS1LP35410 378 aa16.29■□□□□ 0.2
SMARCC2-210ENST00000550519 PLECQ15149 4684 aaKnown RBP16.29■□□□□ 0.2
SMARCC2-210ENST00000550519 C22orf42Q6IC83 251 aa16.29■□□□□ 0.2
SMARCC2-210ENST00000550519 DPPA5A6NC42 116 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 ARL3P36405 182 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 CLEC19AQ6UXS0 136 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 MFSD4AQ8N468 514 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 NUDCD2Q8WVJ2 157 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 TCTEX1D2Q8WW35 142 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 CACNG8Q8WXS5 425 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 FYTTD1Q96QD9 318 aaKnown RBP16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 SPATA2Q9UM82 520 aa16.28■□□□□ 0.2
SMARCC2-210ENST00000550519 TMEM213A2RRL7 107 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 SMIM30A4D0T7 59 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 TMEM235A6NFC5 223 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 IGHV3-23P01764 117 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 AREGP15514 252 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 PSMB6P28072 239 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 SLC16A13Q7RTY0 426 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 TMEM61Q8N0U2 210 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 ANXA10Q9UJ72 324 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 BLOC1S6Q9UL45 172 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 S4R3C0 116 aa16.27■□□□□ 0.2
SMARCC2-210ENST00000550519 NOTOA8MTQ0 251 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 A8MWP6 167 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 CTRB1P17538 263 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 FAM106AQ4KMX7 169 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 ZNF57Q68EA5 555 aaPredicted RBP16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 CTRB2Q6GPI1 263 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 ZNF66Q6ZN08 573 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 TAS2R8Q9NYW2 309 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 MLXQ9UH92 298 aa16.26■□□□□ 0.19
SMARCC2-210ENST00000550519 SSX5O60225 188 aa16.25■□□□□ 0.19
SMARCC2-210ENST00000550519 DHFRP00374 187 aa16.25■□□□□ 0.19
SMARCC2-210ENST00000550519 UXS1Q8NBZ7 420 aa16.25■□□□□ 0.19
SMARCC2-210ENST00000550519 EEF1AKMT3Q96AZ1 226 aa16.25■□□□□ 0.19
SMARCC2-210ENST00000550519 SELENOKQ9Y6D0 94 aa16.25■□□□□ 0.19
SMARCC2-210ENST00000550519 ZNF320A2RRD8 509 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 CGB1A6NKQ9 187 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 SCGNO76038 276 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 HRASP01112 189 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 HIST1H1BP16401 226 aaKnown RBP16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 FGF9P31371 208 aaPredicted RBP16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 GNG2P59768 71 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 RPL8P62917 257 aaKnown RBP16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 SSX9Q7RTT3 188 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 CNBD2Q96M20 576 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 GPHA2Q96T91 129 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 ALMS1Q8TCU4 4167 aa16.24■□□□□ 0.19
SMARCC2-210ENST00000550519 IGLV11-55A0A075B6I3 123 aa16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 MYOD1P15172 320 aa16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 OR4A47Q6IF82 309 aa16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 OR52B4Q8NGK2 314 aa16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 TXNL4BQ9NX01 149 aaKnown RBP16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 BET1LQ9NYM9 111 aa16.23■□□□□ 0.19
SMARCC2-210ENST00000550519 TRBV7-1A0A0A6YYK4 115 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 MFSD2BA6NFX1 497 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 CLEC3BP05452 202 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 HLA-GP17693 338 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 HSPA13P48723 471 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 MSMO1Q15800 293 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 IZUMO2Q6UXV1 221 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 OR4A5Q8NH83 315 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 CXorf58Q96LI9 332 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 OVOL2Q9BRP0 275 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 GGTLC1Q9BX51 225 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 VCX3BQ9H321 246 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 DAPK2Q9UIK4 370 aa16.22■□□□□ 0.19
SMARCC2-210ENST00000550519 SCAF4O95104 1147 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-210ENST00000550519 REG1AP05451 166 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms