RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PSG4Q00888 419 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 GRK1Q15835 563 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 SMARCD3Q6STE5 483 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 TBC1D19Q8N5T2 526 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 RNASE6Q93091 150 aaKnown RBP2.01□□□□□ -2.09
SNRPF-202ENST00000549580 BORCS7Q96B45 105 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 BTF3L4Q96K17 158 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 CMSS1Q9BQ75 279 aaKnown RBP2.01□□□□□ -2.09
SNRPF-202ENST00000549580 MIEN1Q9BRT3 115 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 DCSTAMPQ9H295 470 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 DOK5Q9P104 306 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 PKIGQ9Y2B9 76 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 PRELID3BQ9Y3B1 194 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 VPS37CA5D8V6 355 aaPredicted RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 TMEM235A6NFC5 223 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 A8MUN3 132 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 TXNDC9O14530 226 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 PLA2G10O15496 165 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 NOS1APO75052 506 aaPredicted RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 ZNF705DP0CH99 300 aaPredicted RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 RAB13P51153 203 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 FXYD7P58549 80 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 SNRPD2P62316 118 aaKnown RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 RPL30P62888 115 aaKnown RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 HIST1H3AP68431 136 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 H3F3AP84243 136 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 CDK10Q15131 360 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 CHCHD2P9Q5T1J5 151 aaPredicted RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 LPCAT3Q6P1A2 487 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 OR5C1Q8NGR4 320 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 KIFC1Q9BW19 673 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 PRTFDC1Q9NRG1 225 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 CMTM6Q9NX76 183 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 MRPL27Q9P0M9 148 aaKnown RBP2□□□□□ -2.09
SNRPF-202ENST00000549580 SDK2Q58EX2 2172 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 NCOA1Q15788 1441 aa2□□□□□ -2.09
SNRPF-202ENST00000549580 CACNA1SQ13698 1873 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 IGHV3-15A0A0B4J1V0 119 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 TMEM269A0A1B0GVZ9 245 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 OR4C46A6NHA9 309 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 E7EQL1 145 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 SULT1B1O43704 296 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 NPYP01303 97 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 HLA-DRB1P01911 266 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 IGKV4-1P06312 121 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 SRP19P09132 144 aaKnown RBP1.99□□□□□ -2.09
SNRPF-202ENST00000549580 CD24P25063 80 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 XCL1P47992 114 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 TNFRSF9Q07011 255 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 GUK1Q16774 197 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 C2orf91Q6ZV80 131 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 OR6V1Q8N148 313 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 ANKRD29Q8N6D5 301 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 CLDND2Q8NHS1 167 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 SMCR5Q8TEV8 140 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 CEP19Q96LK0 163 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 SIGMAR1Q99720 223 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 COMMD5Q9GZQ3 224 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 NMNAT1Q9HAN9 279 aaPredicted RBP1.99□□□□□ -2.09
SNRPF-202ENST00000549580 STOML2Q9UJZ1 356 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 MMACHCQ9Y4U1 282 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 ARL5AQ9Y689 179 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 MINOS1-NBL1R4GNA1 71 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 NUP160Q12769 1436 aa1.99□□□□□ -2.09
SNRPF-202ENST00000549580 WRNQ14191 1432 aaPredicted RBP eCLIP1.99□□□□□ -2.09
SNRPF-202ENST00000549580 ABCC12Q96J65 1359 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 DSCAMO60469 2012 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 I3L521 148 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 SERPINA7P05543 415 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 UCHL1P09936 223 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 BLVRBP30043 206 aaPredicted RBP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 FUSP35637 526 aaKnown RBP eCLIP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 MAGEA12P43365 314 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 RPL5P46777 297 aaKnown RBP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 CSN1S1P47710 185 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 AP1S1P61966 158 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 GLO1Q04760 184 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 KCNJ8Q15842 424 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 IAH1Q2TAA2 248 aaPredicted RBP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 LIN52Q52LA3 116 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 SSX8Q7RTT4 187 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 OR4C16Q8NGL9 310 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 ACOT12Q8WYK0 555 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 KLK6Q92876 244 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 FGF13Q92913 245 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 PHB2Q99623 299 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 XAGE1AQ9HD64 81 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 PAQR5Q9NXK6 330 aaPredicted RBP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 RSL24D1Q9UHA3 163 aaKnown RBP1.98□□□□□ -2.09
SNRPF-202ENST00000549580 MTUS2Q5JR59 1369 aa1.98□□□□□ -2.09
SNRPF-202ENST00000549580 ZNF407Q9C0G0 2248 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 TRBV20OR9-2A0A075B6H5 130 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 A0A0J9YX75 114 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 A0A0J9YY10 115 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 MDFIC2A0A1B0GVS7 189 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 A0A1B0GX78 115 aa1.97□□□□□ -2.09
SNRPF-202ENST00000549580 A0A1W2PQD3 144 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms