RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SPINT2O43291 252 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 KITLGP21583 273 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 CBLN1P23435 193 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 FOXL1Q12952 345 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 RAB1CQ92928 201 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 MS4A10Q96PG2 267 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 ARRDC1-AS1Q9H2J1 176 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 LAMA5O15230 3695 aa11.71□□□□□ -0.53
RAPGEF3-218ENST00000548919 FRMD6-AS1P0C7T7 363 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 OPRK1P41145 380 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF134P52741 427 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 SOX8P57073 446 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 TCTEX1D1Q8N7M0 179 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 LEAP2Q969E1 77 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 C1orf159Q96HA4 380 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 TRIB1Q96RU8 372 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 NAGKQ9UJ70 344 aa11.71□□□□□ -0.54
RAPGEF3-218ENST00000548919 FOXH1O75593 365 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 TIMP3P35625 211 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 RAB4BP61018 213 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 TRIP6Q15654 476 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 SMIM21Q3B7S5 101 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 CDX2Q99626 313 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 K7EN84 100 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 GFRA3O60609 400 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 VDAC2P45880 294 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 SPCS3P61009 180 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 C1orf229Q6ZS94 237 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 SVILO95425 2214 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 CADP27708 2225 aa11.7□□□□□ -0.54
RAPGEF3-218ENST00000548919 IGHV3OR15-7A0A075B7D8 119 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 CXorf1O96002 111 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 HPRT1P00492 218 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 PRDX2P32119 198 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 MORN2Q502X0 79 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 VWA1Q6PCB0 445 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 INO80CQ6PI98 192 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 TP53TG3Q9ULZ0 132 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 LNP1A1A4G5 178 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 RPL31P62899 125 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 ALKBH2Q6NS38 261 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 DUSP13Q9UII6 198 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 ICE1Q9Y2F5 2266 aa11.69□□□□□ -0.54
RAPGEF3-218ENST00000548919 TNFSF15O95150 251 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 CECR9P0C854 216 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 MYOD1P15172 320 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 RELBQ01201 579 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF90Q03938 601 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF124Q15973 351 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 Q6ZT83 130 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 CMTM2Q8TAZ6 248 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 TBX15Q96SF7 602 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 NEU1Q99519 415 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 TMEM140Q9NV12 185 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 MPDU1O75352 247 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ADH4P08319 380 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 G0S2P27469 103 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 LINC00310P59036 64 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ERVFC1-1P60608 527 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 HTD2P86397 168 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF718Q3SXZ3 478 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ARSJQ5FYB0 599 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
RAPGEF3-218ENST00000548919 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 F2Z2F3 143 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 IGKV3-15P01624 115 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 GCHFRP30047 84 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR5I1Q13606 314 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 EFNB3Q15768 340 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 DHRS13Q6UX07 377 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR2Z1Q8NG97 314 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 DCHS1Q96JQ0 3298 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 HOXC12P31275 282 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 ERVK-16P61578 105 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 Q6ZWC4 215 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 FAM122AQ96E09 287 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 PRO3102Q9H379 93 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms