RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 PLAC9Q5JTB6 97 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 ARRDC1Q8N5I2 433 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 OR10V1Q8NGI7 309 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 OR1L1Q8NH94 360 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 CASTOR1Q8WTX7 329 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 NUDCD2Q8WVJ2 157 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 GINS4Q9BRT9 223 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
CDX2-202ENST00000548877 RANGRFQ9HD47 186 aaPredicted RBP10.3□□□□□ -0.76
CDX2-202ENST00000548877 KCNK7Q9Y2U2 307 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 DNAH10Q8IVF4 4471 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 UBE2QL1A1L167 161 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 RBMY1BA6NDE4 496 aaKnown RBP10.29□□□□□ -0.76
CDX2-202ENST00000548877 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 RBMY1EA6NEQ0 496 aaKnown RBP10.29□□□□□ -0.76
CDX2-202ENST00000548877 RRHO14718 337 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 GLAP06280 429 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 RBMY1DP0C7P1 496 aaKnown RBP10.29□□□□□ -0.76
CDX2-202ENST00000548877 FUT3P21217 361 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 EIF2B2P49770 351 aaKnown RBP10.29□□□□□ -0.76
CDX2-202ENST00000548877 ATAD3CQ5T2N8 411 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 GTSCR1Q86UQ5 136 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 HOGA1Q86XE5 327 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 OR51S1Q8NGJ8 323 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 OR6F1Q8NGZ6 308 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 OR4K15Q8NH41 348 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 GIMAP1Q8WWP7 306 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 ABHD14AQ9BUJ0 271 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 RETNQ9HD89 108 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 OR2S2Q9NQN1 319 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
CDX2-202ENST00000548877 TRAPPC2LQ9UL33 140 aa10.29□□□□□ -0.76
CDX2-202ENST00000548877 A0A0B4J293 547 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 FCN1O00602 326 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 SSX5O60225 188 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 CREBL2O60519 120 aaPredicted RBP10.28□□□□□ -0.76
CDX2-202ENST00000548877 YPEL1O60688 119 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 FCER2P06734 321 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 OR3A3P47888 321 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 TPPP2P59282 170 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 HTD2P86397 168 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 LCN12Q6JVE5 192 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 GLDNQ6ZMI3 551 aaPredicted RBP10.28□□□□□ -0.76
CDX2-202ENST00000548877 IDO2Q6ZQW0 420 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 TCTE3Q8IZS6 198 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 DRAXINQ8NBI3 349 aaPredicted RBP10.28□□□□□ -0.76
CDX2-202ENST00000548877 OR5H2Q8NGV7 314 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 NEK7Q8TDX7 302 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 SNAPC3Q92966 411 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
CDX2-202ENST00000548877 JPT1Q9UK76 154 aa10.28□□□□□ -0.76
CDX2-202ENST00000548877 MCRIP1C9JLW8 97 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 H3BUA1 57 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 SSNA1O43805 119 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 SLC25A17O43808 307 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 BRI3O95415 125 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 RLN1P04808 185 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 RCC1P18754 421 aaPredicted RBP10.27□□□□□ -0.77
CDX2-202ENST00000548877 HRH1P35367 487 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 CDK10Q15131 360 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 UNQ5815/PRO19632Q6UWF5 114 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 ZNF562Q6V9R5 426 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 BEST4Q8NFU0 473 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 ASB13Q8WXK3 278 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 MS4A10Q96PG2 267 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 RNF5Q99942 180 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 CMSS1Q9BQ75 279 aaKnown RBP10.27□□□□□ -0.77
CDX2-202ENST00000548877 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 TAF9BQ9HBM6 251 aa10.27□□□□□ -0.77
CDX2-202ENST00000548877 M0QYG6 137 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 TRGV3P03979 118 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 CSN3P07498 182 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 ZNF735P0CB33 412 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 TAS2R31P59538 309 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 UBE2MP61081 183 aaKnown RBP10.26□□□□□ -0.77
CDX2-202ENST00000548877 CBX3Q13185 183 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 GNMTQ14749 295 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 SCGB2B2Q4G0G5 96 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 FAAP20Q6NZ36 180 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 LFNGQ8NES3 379 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 OR4D10Q8NGI6 311 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 OR2K2Q8NGT1 345 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 TINAGL1Q9GZM7 467 aaPredicted RBP10.26□□□□□ -0.77
CDX2-202ENST00000548877 C12orf4Q9NQ89 552 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 ELF5Q9UKW6 265 aaPredicted RBP10.26□□□□□ -0.77
CDX2-202ENST00000548877 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
CDX2-202ENST00000548877 SAA2-SAA4A0A096LPE2 208 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 SNAPC5O75971 98 aa10.25□□□□□ -0.77
CDX2-202ENST00000548877 SAA2P0DJI9 122 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms