RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 LY6EQ16553 131 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 DHRS7BQ6IAN0 325 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-227ENST00000548080 GRPEL2Q8TAA5 225 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 DPM3Q9P2X0 92 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 CACNG5Q9UF02 275 aa13.95□□□□□ -0.18
HDAC7-227ENST00000548080 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
HDAC7-227ENST00000548080 MARCH11A6NNE9 402 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 SCGB1D2O95969 90 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-227ENST00000548080 RLN2P04090 185 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 PET100P0DJ07 73 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 NQO2P16083 231 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 CEACAM3P40198 252 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 S100A10P60903 97 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 ERVK-16P61578 105 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 TMEM65Q6PI78 240 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 Q6ZRM9 215 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 H2BFWTQ7Z2G1 175 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 OR1S1Q8NH92 325 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 RPEQ96AT9 228 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 SSX3Q99909 188 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 RNF126Q9BV68 326 aa13.94□□□□□ -0.18
HDAC7-227ENST00000548080 H0YIZ8 118 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 H7C2Y5 167 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 ST8SIA3O43173 380 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 PITX3O75364 302 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 SNAPC5O75971 98 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 RNASE1P07998 156 aaKnown RBP13.93□□□□□ -0.18
HDAC7-227ENST00000548080 MC5RP33032 325 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 LAMTOR1Q6IAA8 161 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 COA4Q9NYJ1 87 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 MBD2Q9UBB5 411 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 LSM5Q9Y4Y9 91 aaKnown RBP13.93□□□□□ -0.18
HDAC7-227ENST00000548080 IGHV1-3A0A0C4DH29 117 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 FAM181BA6NEQ2 426 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 HRASP01112 189 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 LYL1P12980 280 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 NKX2-1P43699 371 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-227ENST00000548080 ID3Q02535 119 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 LRRC75BQ2VPJ9 315 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 MINOS1Q5TGZ0 78 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 ZNF546Q86UE3 836 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 PDPNQ86YL7 162 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 FOXRED2Q8IWF2 684 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 C9orf62Q8N4C0 152 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 DMBX1Q8NFW5 382 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 AIFM2Q9BRQ8 373 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 MEGF9Q9H1U4 602 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 WASHC3Q9Y3C0 194 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 POMT1Q9Y6A1 747 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 MINOS1-NBL1R4GNA1 71 aa13.93□□□□□ -0.18
HDAC7-227ENST00000548080 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 K7EPK0 472 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 ARPC5O15511 151 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 GPR137BO60478 399 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 CD24P25063 80 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 ARHGDIBP52566 201 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 LGALSLQ3ZCW2 172 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-227ENST00000548080 TMEM177Q53S58 311 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 CXorf66Q5JRM2 361 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-227ENST00000548080 SSX9Q7RTT3 188 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 MOB3BQ86TA1 216 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 FAM71E2Q8N5Q1 922 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 OSR1Q8TAX0 266 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-227ENST00000548080 FLYWCH2Q96CP2 140 aaKnown RBP13.92□□□□□ -0.18
HDAC7-227ENST00000548080 MALSU1Q96EH3 234 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-227ENST00000548080 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
HDAC7-227ENST00000548080 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 OOSP1A8MZH6 123 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 CLDN34H7C241 214 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 DEDDO75618 318 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 IGKV1-16P04430 117 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 POU2AF1Q16633 256 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 VKORC1L1Q8N0U8 176 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 OR4C13Q8NGP0 309 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 DCUN1D4Q92564 292 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 RHOVQ96L33 236 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 TNFSF18Q9UNG2 199 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 HSPB11Q9Y547 144 aa13.91□□□□□ -0.18
HDAC7-227ENST00000548080 SHOXO15266 292 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 CXCL2P19875 107 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 FBLN7Q53RD9 439 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 TMEM219Q86XT9 240 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 OR8H3Q8N146 312 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 TMEM86BQ8N661 226 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 RBMXL1Q96E39 390 aaKnown RBP13.9□□□□□ -0.18
HDAC7-227ENST00000548080 MFFQ9GZY8 342 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 TMEM140Q9NV12 185 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
HDAC7-227ENST00000548080 RCL1Q9Y2P8 373 aaKnown RBP13.9□□□□□ -0.18
HDAC7-227ENST00000548080 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms