RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF729A6NN14 1252 aaPredicted RBP12.78□□□□□ -0.36
BRF1-212ENST00000547562 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
BRF1-212ENST00000547562 KBTBD11O94819 623 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 IRF2P14316 349 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 TDGF1P3P51864 188 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 MRPS11P82912 194 aaKnown RBP12.78□□□□□ -0.36
BRF1-212ENST00000547562 KIAA0141Q14154 515 aaPredicted RBP12.78□□□□□ -0.36
BRF1-212ENST00000547562 TEX36Q5VZQ5 186 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 LYG1Q8N1E2 194 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 ABHD17AQ96GS6 310 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 RHOVQ96L33 236 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 LINC00574Q9H8X3 128 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 IDI2-AS1Q9NZ38 188 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 PCNX1Q96RV3 2341 aa12.78□□□□□ -0.36
BRF1-212ENST00000547562 SMCO3A2RU48 225 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 SEC14L6B5MCN3 397 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 C16orf97H3BN30 126 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 SOX15O60248 233 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 SMIM6P0DI80 62 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 TMPRSS3P57727 454 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 TREML4Q6UXN2 200 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 ZNF383Q8NA42 475 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 ADTRPQ96IZ2 230 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 DCAF16Q9NXF7 216 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 TMEM241Q24JQ0 296 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 OR4A47Q6IF82 309 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 TMEM170AQ8WVE7 144 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 CORO2AQ92828 525 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
BRF1-212ENST00000547562 OR4F4Q96R69 305 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
BRF1-212ENST00000547562 APC2O95996 2303 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 CCL8P80075 99 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 TCEAL7Q9BRU2 100 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 FOXA2Q9Y261 457 aaPredicted RBP12.76□□□□□ -0.37
BRF1-212ENST00000547562 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 ROS1P08922 2347 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 PAGE4O60829 102 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 MMP23AO75900 390 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 OPRK1P41145 380 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 GNG10P50151 68 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 ADIRFQ15847 76 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 GCSAMLQ5JQS6 135 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 WFDC8Q8IUA0 241 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 RAB1CQ92928 201 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 FAM210BQ96KR6 192 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 SSX3Q99909 188 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 PARLQ9H300 379 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 MS4A5Q9H3V2 200 aa12.76□□□□□ -0.37
BRF1-212ENST00000547562 DPRXA6NFQ7 191 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 S100A9P06702 114 aaKnown RBP12.75□□□□□ -0.37
BRF1-212ENST00000547562 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 ADIPOQQ15848 244 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 CISD2Q8N5K1 135 aaKnown RBP12.75□□□□□ -0.37
BRF1-212ENST00000547562 OR13D1Q8NGV5 346 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
BRF1-212ENST00000547562 SPTBN2O15020 2390 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 PIEZO2Q9H5I5 2752 aa12.75□□□□□ -0.37
BRF1-212ENST00000547562 TRAV38-1A0A0B4J264 116 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 OPN1MWP04001 364 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 HSPE1P61604 102 aaKnown RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 TMEM249Q2WGJ8 235 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 ZCCHC14Q8WYQ9 949 aaKnown RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 SNRNP40Q96DI7 357 aaKnown RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 MGST2Q99735 147 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 TMPRSS2O15393 492 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 YIF1AO95070 293 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 HRASP01112 189 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 OR4A8P0C604 315 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 RPL23P62829 140 aaKnown RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 SLC25A48Q6ZT89 311 aaKnown RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 Q8NA96 180 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 NEIL1Q96FI4 390 aaPredicted RBP12.74□□□□□ -0.37
BRF1-212ENST00000547562 GGTLC1Q9BX51 225 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 TNCP24821 2201 aa12.74□□□□□ -0.37
BRF1-212ENST00000547562 TRBV24-1A0A075B6N3 115 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 hADV38S2A0JD32 116 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 TRGC2P03986 189 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 HOXA5P20719 270 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 BSPH1Q075Z2 132 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 BSXQ3C1V8 233 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 SLC16A13Q7RTY0 426 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 LINC00312Q9Y6C7 94 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 DMXL2Q8TDJ6 3036 aa12.73□□□□□ -0.37
BRF1-212ENST00000547562 A0A1W2PPV4 95 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms