RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 PSMG3Q9BT73 122 aaPredicted RBP12.7□□□□□ -0.38
BRF1-211ENST00000547530 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
BRF1-211ENST00000547530 A8MXE2 369 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 NEURL1O76050 574 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 CCKARP32238 428 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 WDR86Q86TI4 376 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 CT55Q8WUE5 264 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 HIPK2Q9H2X6 1198 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 TMEM106BQ9NUM4 274 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 B4GALT7Q9UBV7 327 aa12.7□□□□□ -0.38
BRF1-211ENST00000547530 ETV2O00321 342 aaPredicted RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 SNAI2O43623 268 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 ERVK-16P61578 105 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 SPATA45Q537H7 98 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 RBM14Q96PK6 669 aaKnown RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 SSBP4Q9BWG4 385 aaPredicted RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 SRIP30626 198 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 MPV17P39210 176 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 HNRNPA3P51991 378 aaKnown RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 POM121L2Q96KW2 1035 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 OPN3Q9H1Y3 402 aaPredicted RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 TBL2Q9Y4P3 447 aaKnown RBP12.69□□□□□ -0.38
BRF1-211ENST00000547530 TRAV1-1A0A0B4J248 108 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 A0A1W2PRD5 423 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 A0A1W2PRF3 423 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 A0A1W2PRM7 423 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 J3QT63 122 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 M0QZ24 198 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 HOXC12P31275 282 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 DCAF12Q5T6F0 453 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 PPP1R32Q7Z5V6 425 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
BRF1-211ENST00000547530 CBY3A6NI87 242 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
BRF1-211ENST00000547530 OR2Z1Q8NG97 314 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 UBE2ZQ9H832 354 aaPredicted RBP12.68□□□□□ -0.38
BRF1-211ENST00000547530 YTHDF2Q9Y5A9 579 aaKnown RBP12.68□□□□□ -0.38
BRF1-211ENST00000547530 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 MKRN2OSH3BPM6 223 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 CD46P15529 392 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 CHRNB4P30926 498 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 REG1BP48304 166 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 TBC1D28Q2M2D7 210 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 UTF1Q5T230 341 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 UNQ5815/PRO19632Q6UWF5 114 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 SPEM1Q8N4L4 309 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 TMEM251Q8N6I4 163 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 TMEM242Q9NWH2 141 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
BRF1-211ENST00000547530 TMEM30CPA0ZSE6 113 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 RAB7AP51149 207 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 DYSFO75923 2080 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 SPINT2O43291 252 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 WISP2O76076 250 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 FOXA3P55318 350 aaPredicted RBP12.67□□□□□ -0.38
BRF1-211ENST00000547530 TPPP3Q9BW30 176 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 ZFHX2Q9C0A1 2572 aaPredicted RBP12.67□□□□□ -0.38
BRF1-211ENST00000547530 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 GNG4P50150 75 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 SOX8P57073 446 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 RELBQ01201 579 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 MIR17HGQ75NE6 70 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 APC2O95996 2303 aa12.67□□□□□ -0.38
BRF1-211ENST00000547530 LY6G6EA0A0G2JKS1 128 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 DLEU1O43261 78 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 CSN3P07498 182 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 ZNF137PP52743 207 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 TMEM14EPQ6UXP3 125 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 LYG1Q8N1E2 194 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 LSM10Q969L4 123 aaKnown RBP12.66□□□□□ -0.38
BRF1-211ENST00000547530 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 RCHY1Q96PM5 261 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 ASCL2Q99929 193 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 TTTY12Q9BZ98 90 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 U3KQA8 63 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 DKK1O94907 266 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 PSG7Q13046 419 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 VAMP3Q15836 100 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 Q6ZR03 302 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 BLNKQ8WV28 456 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 GNB4Q9HAV0 340 aa12.66□□□□□ -0.38
BRF1-211ENST00000547530 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms