RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KRTAP24-1Q3LI83 254 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 ABCA11PQ4W5N1 156 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 LPCAT3Q6P1A2 487 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 FAM71E2Q8N5Q1 922 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 C5orf56Q8N8D9 126 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 CCDC71LQ8N9Z2 235 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 POC5Q8NA72 575 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 OR4C13Q8NGP0 309 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 MARCH1Q8TCQ1 289 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 C7orf50Q9BRJ6 194 aaKnown RBP5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RANBP3Q9H6Z4 567 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-211ENST00000546304 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 C14orf166Q9Y224 244 aaKnown RBP5.03□□□□□ -1.6
PRKDC-211ENST00000546304 NCBP2LA6PVI3 153 aaKnown RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CENPXA8MT69 81 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 H0Y980 276 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 LYRM1O43325 122 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 SLC25A17O43808 307 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 RAMP3O60896 148 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 PGLYRP1O75594 196 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 NDUFA3O95167 84 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 NDUFA7O95182 113 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 AMY1AP04745 511 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CRYBA1P05813 215 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CTSDP07339 412 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 F2RP25116 425 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CNTFRP26992 372 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CCR6P51684 374 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 ASAH1Q13510 395 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 C5orf64Q2M2E5 130 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 C11orf88Q6PI97 169 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 Q6ZSV7 163 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TBC1D26Q86UD7 250 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 SPAG16Q8N0X2 631 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 Q8N9W7 124 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 ZFAND1Q8TCF1 268 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 CD300LFQ8TDQ1 290 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TAF15Q92804 592 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 FLYWCH2Q96CP2 140 aaKnown RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TSC22D3Q99576 134 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TSNAXQ99598 290 aaKnown RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 RNF5Q99942 180 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 SLC25A21Q9BQT8 299 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 C19orf24Q9BVV8 132 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 C5orf66Q9H5L9 145 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 ZNF702PQ9H963 129 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 PLSCR3Q9NRY6 295 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 C1RLQ9NZP8 487 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 COMMD9Q9P000 198 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 COPZ2Q9P299 210 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TBC1D24Q9ULP9 559 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 VSIG4Q9Y279 399 aa5.02□□□□□ -1.61
PRKDC-211ENST00000546304 TET2Q6N021 2002 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-211ENST00000546304 VWFP04275 2813 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 SH2D7A6NKC9 451 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-211ENST00000546304 RRHO14718 337 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 MPPED1O15442 326 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 PLA2G10O15496 165 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 S1PR2O95136 353 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 NDUFB6O95139 128 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 IGLV2-23P01705 113 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 HLA-DRB1P01911 266 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 SAA1P0DJI8 122 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-211ENST00000546304 HKR1P10072 659 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 F2RL1P55085 397 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 BRWD1-AS2P59051 145 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 UBE2KP61086 200 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
PRKDC-211ENST00000546304 PLGLAQ15195 96 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 PSG5Q15238 335 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 VMA21Q3ZAQ7 101 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 TMED4Q7Z7H5 227 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 CENPSQ8N2Z9 138 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 TCTEX1D1Q8N7M0 179 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 NPBQ8NG41 125 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 OR4F5Q8NH21 305 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 OR2T6Q8NHC8 308 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM158Q8WZ71 300 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM230Q96A57 120 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 RITA1Q96K30 269 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 SCGB3A2Q96PL1 93 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 PRSS22Q9GZN4 317 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 NAA60Q9H7X0 242 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 PLEKHA2Q9HB19 425 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 METTL1Q9UBP6 276 aaKnown RBP5.01□□□□□ -1.61
PRKDC-211ENST00000546304 GPR132Q9UNW8 380 aa5.01□□□□□ -1.61
PRKDC-211ENST00000546304 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 TEX13DA0A0J9YY54 714 aaPredicted RBP5□□□□□ -1.61
PRKDC-211ENST00000546304 C3orf85A0A1B0GTC6 90 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 CRYM-AS1A6NIL9 109 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 MARCH11A6NNE9 402 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 SRRM4A7MD48 611 aaKnown RBP5□□□□□ -1.61
PRKDC-211ENST00000546304 KCNAB3O43448 404 aa5□□□□□ -1.61
PRKDC-211ENST00000546304 CREBL2O60519 120 aaPredicted RBP5□□□□□ -1.61
PRKDC-211ENST00000546304 B3GALNT1O75752 331 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms